Gene Cyan7425_2260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_2260 
Symbol 
ID7288188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp2182552 
End bp2183874 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content52% 
IMG OID643585256 
Producturea ABC transporter, urea binding protein 
Protein accessionYP_002482982 
Protein GI220907671 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID[TIGR03407] urea ABC transporter, urea binding protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.411735 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAG GATTTGGAAG ACGTAAGTTT ATTCTTTATG GTACTGCCGC CTTAGGCACG 
AGTGTCCTGT TGAAAGCCTG TGGTGGTCAG CCAGACACTG CAACCAGCCC ATCCCCTGGG
GGTTCTCCAG CCGCCGGTGG TGAAACCATT AAGGTAGGGA TTTTGCACTC TCTCAGCGGC
ACCATGGCGA TCAGTGAAAA GAGCGTTGTG GATGCTGAGC AGTTAGCGAT CGAAGAAATC
AACAAAGCTG GTGGTGTCCT GGGCAAGCAA ATTGAAGCAG TCGTAGAAGA CGGAGCTTCA
GACTGGCCCA CCTTTGCCGA AAAAGCCAAA AAGCTGATCG AGCAGGACAA AGTTGCAACG
GTGTTTGGCT GCTGGACCTC TGCCAGTCGT AAAGCCGTTC TGCCCGTGTT TGAGTCCAAA
CAACACATGC TCTGGTATCC GGTGCAGTAC GAAGGGCAAG AATGTTCCAA GAACATCTTC
TACACTGGTG CAGCTCCTAA CCAGCAAATC GAGCCTTCCG TGGACTGGCT GTTAGAGCAG
TACAAAGATC AGCCCTTCTA TCTGGTGGGA TCAGACTACG TTTTCCCCCG CACGGCGAAC
ACGATCATCA AAGCTCAACT CGCCGCTAAG GGTGGCAAGG TCGTCGGTGA AGACTATATC
CCCCTGGGTG GTACGGAAGT AACCCCGTTG ATCTCCAAGA TTAAAACCGC CATGCCCAAC
GGTGGGATTA TCTACAACAG CCTCAACGGT GACAGCAACG TGGCGTTCTT CAAGCAACTG
CAGGGTGCAG GTCTGGGTCC AGATAAGTAT CCCTCCATGT CGGTCAGTAT TGCGGAAGAA
GAAGTTAAGG CGATCGGTCC GGAATACCTG AAGGGCCACT TTGCCGCCTG GAACTACTTC
ATGACCGTGG ATAACCCGGC CAACAAGAAG TTTGTTGATG CTTTCAAAGC CAAGTATGGC
GAAGATCGGG TGACCAATGA CCCGATGGAA GCTGCCTATA TCATGGTTTA CCTCTGGAAG
CAGGCTGTGG AGAAAGCCGG TACAGCAGAT GATCTGGAGA AGGTGCGGGC GGCCGCGATC
GGTCAGAGCA TCGATGCCCC AGAAGGTCCG GATGTCACCA TGCAAAGCAA TCACCACATT
TCCAAGTATG TGCGGATTGG TAAGGTGCGT GAAGATGGAC TGTTCGAGAT TGTTTATGCT
TCGGACAAAC CCGTCAACCC CGTTCCCTGG AACCAGTACG TAGCCGAGAC TAAGGGCTAT
ACCTGTGATT GGACCAATAC TACGGAAGCC AATCCTGGTA AGTTCAAGAT GACTGGAACC
TGA
 
Protein sequence
MTEGFGRRKF ILYGTAALGT SVLLKACGGQ PDTATSPSPG GSPAAGGETI KVGILHSLSG 
TMAISEKSVV DAEQLAIEEI NKAGGVLGKQ IEAVVEDGAS DWPTFAEKAK KLIEQDKVAT
VFGCWTSASR KAVLPVFESK QHMLWYPVQY EGQECSKNIF YTGAAPNQQI EPSVDWLLEQ
YKDQPFYLVG SDYVFPRTAN TIIKAQLAAK GGKVVGEDYI PLGGTEVTPL ISKIKTAMPN
GGIIYNSLNG DSNVAFFKQL QGAGLGPDKY PSMSVSIAEE EVKAIGPEYL KGHFAAWNYF
MTVDNPANKK FVDAFKAKYG EDRVTNDPME AAYIMVYLWK QAVEKAGTAD DLEKVRAAAI
GQSIDAPEGP DVTMQSNHHI SKYVRIGKVR EDGLFEIVYA SDKPVNPVPW NQYVAETKGY
TCDWTNTTEA NPGKFKMTGT