Gene Cyan7425_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_1798 
Symbol 
ID7287722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp1660877 
End bp1665382 
Gene Length4506 bp 
Protein Length1501 aa 
Translation table11 
GC content55% 
IMG OID643584796 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_002482526 
Protein GI220907215 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGGG TCAAGCCCCC CCAAATTGTT TTTAGCGGTA ATAGTGAGAT GTCCCGATGG 
CTACAATCCC AGGATTGGGA CCACACTGCC CTGGGATCGG TGGCAAACTG GCCCCTGAGT
TTACAAACCA GCCTCTCGAT TCTGCTCAAC ACGGCTTGCC CAATGGTGCT GGTCTGGGGG
CGCGATCGCT ACCTGTTTTT TAACGATGGC TATGCCAATC TGGGCCTGAA TTCTGGGCCT
ACCCTGATCC CTGGCCAGCC CCTCCACAAT TGTTCTCAGC CCAATGGGGG GGAACTGCTC
ACTGCGATCG AACAGGTATT TACTACAGCC CAACCACAGC AGCAGGTTCT CGCTTCCCAG
GGAATGTCAG GGGAACAGCT CTGGCTGTGG TGCTTCAGTC CGCTCTGGGA TGGCGGCCAG
GTGGGGGGAG TCTTTGCCAC GGGCTGTGCA GAGCTAAATC CGATCGCGGG AACTACAAAA
CTGGAAGCTG AATGCCGACA AGTAGAAACG GAACGCCAGC ACCTGTCTGA GGCTTTGCTG
TCTGAAAAAG CCCGGTTTGA AGCCGTCCTG CGTCAATTGC CCGAAGGAGT GATGATTGCC
GATGCCGCCA CAGGCAACCT GATCCTGACC AATGAACGGG CGGACCAACT GATGCGTCAT
TCCTACGCAC TGGATTTTCA ACTGGAAGCC TACGAGTCAT GGGTGCCCTT TCAGGCTTAC
CGGACTAATG GACAACGCTA TGCCCCAGAG GACTATCCCC TTGTCCGATC GCTGCGTCAG
GGGGAAATTA TTGCCCACGA GGAGATGGAA CTGCGGTTTG CGGATGGTAG CCAGATTTTT
ATCGATGTCA ATGCCGCCCC CATCCTTGAC TACCAGGGGC AGATTACCTC AGCCGTCACC
GTCTTTCAGG ACATTAGCGA GCGGAAGCAA CTGGAAGCCG AACGCCAACA GGCATTAATT
CAGCTGCAGG AAAGACAGCA CTTTATCCAG CAGGTTGCCG ATGCCACCCC AGGAACCCTC
TATGTCTATG ACATGGTGGC CCAGCGCAAC ATTTACGTTA ATCGCCAGAT TGGTGAGTTA
CTGGGCTATA CCCCGGCAGA CATTCAAGCC TATGACGACC AACTCTTTGC TCAACTCATC
CATCCAGAGG ATTTAGCGAC GATTGGCAAC CAGTATACCC GTTTGAATCA GGCTCAAGCG
GATGAGGTGA TTGACTACGA GTACCGCATG CGTCATGCCA ATGGGGAGTG GCGCTGGCTC
TGGAGCCGGA ACACGGTTTC TACCCGTACC CCTGAAGGTC TGGCGCATCT CGTGGTCGGT
ACGGTTCAGG ATATTACCGA TCGCAAGCAG GCTGAACTGG CCCTCCAGCA AACTCAGGTC
CATCTGCAAC GGGCGAATGA GCGGTTTGAA CTGGCCGCAA AAGCCGTCAA CTGTTTAATT
TATGACTGGG ATGTAGAACA GGATCGGGTG GAACGGACGG AGGGGTTCAC ACGGCTTTTA
GGATATTCCC TGGAGGAAGC TGAACCCACG GGGGCCTGGT GGCGACAGCA AATCCATCCC
GAAGATGTGC AACGCCTTTC GGCCACCGCC ATCTCTAACC TGCTGAACAA CGATCTGCAA
ATCTGTGAAT ATCGGGTTCG CACCAAGGAC AACCGCTACA TCTATGTGCT GGATCAGGCC
CTCGTCGTTT GCCGTGATGC CAAAGGCTAT CCTACCCGCA TGGTTGGCAG TACCACAGAT
ATCACCGATC GCAAACGGGC CGAGGCTCAG TTACAGCAAC AGGAACAGGA ATTTCGCACC
CTGGTCGAGA ACACACCGGA TGTGATTATT CGCTACGATC GCAACCTGCG CTACCTGTAC
ATCAACCCCA GCATTGAGCG CATCATTGGC ATTCCACCGG AACAGCTAAT TGGCAAAACC
GGAATTGAGT TGGGCCTGAT CGATCCCACC TCCCAAGCCT GGTATAGAAC CCTAGAACAG
GTGTTCAACA CTGGCCAGCA CCACTGGTTG GAATTCGAAT TTCCCAATCC TGAGGGGGAA
CTGCATGCTT ACCAGGCTCG GTTTGTACCT GAATTAGTCG AGGGAGAACA AATCACCACC
GTTCTTGCGG TTGCAACGGA TGTGACAGAG TACAAGCGCA CCGAACTCTT GCTGCGGCAG
AGCGAAGAAC GGCTGAGACT GGCCATGGCC GCGGCACAGA TGGCCACCTG GGATGTCGAT
CTCAACACTG GCAAAGCCTT CTGGTCAGAA CACCATTTCA CCATGCTGGG TTATGAACCC
GTGGCCGGTG GGGAAGCCAG TGAGGCCATG TGGAGCAGTT GCATTCACCC GGAGGATCTG
GAACGAGTGC TGCAGGCATG GCAACAGGCC AGACTCGATC GCACCCTTTA TCGAGCCGAA
TATCGGGTAA TTCGGGTAGA CAATGGCCAG ATTGCCTGGC TGATGGGGCT GGGTAGCTTT
ACCTATGACG AAACGGGGCA GGCCATCCGG TCGATCGGCG TTTTGTTGGA TATCAGCGAA
CAGCAGGCCG CCCTGCAGGA ACGCAAACGG GTTGAAGATG AACTGCGAGA AAGTGAACAG
CGCCTCCAAC TGGCCCAGCA GGCGGGCAGA ATTGGCACCT GGGACTGGAA TCTGCTCACC
AACGAGGTAT CCTGGTCCGA TGGGATTTGG CCGCTCCTGG CCCTGGAGCC TAAGAGTGTC
AAGCCGGACC TGGAGACCTT CACCCATTTC ATCCATCCCG AGGATCGCGA ACAGGCGTTT
AGAACGGTAA AACTTGCCCT GGCCGAGGGG GACGACTATT ACGACGAATT TCGGGTGATT
CGACAGGATG GGGCGATCTG CTGGCTGCTC TCTAAAGGAC GAGTAATTCG TACCCCGGAG
GGTCAACCCC AGCGGCTCTT GGGGATCAAC GTTGACATTA CCGATCGCAA ACAGGCGGAA
GAAGCCTTAC GACAGAGTGA AGAACGCTTA CGTCTGGCTC TACTGGTGAG TCAATCGGGC
ATTTGGGACT GGGATATTGT CAATAAACAG ATCACCTGGT CAGAGCGAAT TTATCAATTT
CATGGCTTAA CCCCAGACAC CTTTGGGGGC ACGGTTGCAG AGTTTGCTGC CCTGATTCAT
CCTGAGGACC GAGAACGGGT GGCGGCAGCA ATTCAGCGGG CCCTGGCAGG GGAATCCAGC
TATGAACTGG AATTTCGCGC TGTTCAACCC AGTGGGGCAA TTCGCTGGCT CTCCACCACG
GGCGGGGTAA TTTTTGATCA GCAGGGCCAG CCGGTGCGGA TGCTGGGGGC CACCAATGAT
ATTACCGATC GCAAGGCCAT TGAGGCAGAA CGGGAACGGT TGCTCCTGAG TGAACGACGC
TGCAGGGAAG CCGCCGAATC CGCGAACCGC ATCAAGGATG AATTTTTAGC AGTGCTTTCC
CACGAACTGA GATCGCCCCT CAATCCGATT CTGGGCTGGA CCAAACTGCT GCAAACCCGT
CCCTTTGACC CACAACGGAC CCAGCAAGCC CTGCAGACGA TCGAACGCAA CGCCAAACTG
CAGACCCAAC TGATCGAAGA CCTGCTGGAT ATCTCCCGTA TTCTCCAGGG CAAGATGGTA
CTGAACACGT CCCCGGTCAA CCTGATCACC ACGATTGAAG CGGCGTTGGA CACAGTTCGC
CTGGCCGCCG AAACCAAGGG CATTGAGCTG CAAACTTGCC TCAGTCCAGC GGTGGGTAGG
GTCTATGGGG ATAGCACTCG CCTGCAACAG ATCGTCTGGA ATTTACTCAC CAATGCCGTG
AAGTTTACGC CTGCTGGGGG AAAAGTTTTG ATCCGGCTGG AACAGGTAGA CAGCTTTGCC
CAAATTCAGG TGCAGGATAC GGGCAAGGGG ATCAGCCCCG CCTTTCTTCC CCATGTGTTT
GAATATTTCC GCCAGGAAGA TAGCCAGACG ACCCGTAAGT TCGGCGGACT GGGACTGGGA
CTGGCGATCG TCCGCTATCT CACTGAACAG CATGGGGGCA CGGTTGAGGT TGAAAGCCGG
GGGGAAGACC AGGGGGCCAG CTTCACAGTC CACCTGCCCC TGATGGCATC CGATTTAACC
CCTGACCCAG CCGAGCAGCC CTGCATCGAA ACTGCTCAAG ATTTACGGGG ACTCCAGATT
CTGATCGTGG ATGATGACGC CGACATGCGG GATTTGCTCA GTTTTATCCT GACTGAACAG
GGAGCAACCG TAAGGGTGGC CGCCTCCGCC TCGGAAGGCC TGCAACACCT GAGCGCCTCT
CCCCTCGATC TCGATCTATT GATCAGTGAT ATTGGCATGC CCGAGATGGA CGGTTACAGC
CTGATCCGGC AAGCTCGTCA CCTCTTAGCC CCAACCGGAA AGGAACTACC CGCCATCGCC
CTCACCGCCT ACGCAGGGGA AATCAACCAG CAACAGGCCC TAGCGGCCGG ATTCCAACTC
CACCTGGCCA AGCCGATCGA ACCGGATCAG TTGTTAATTA TGATAAAAAA TTTAGTTTTT
AGTTAG
 
Protein sequence
MDRVKPPQIV FSGNSEMSRW LQSQDWDHTA LGSVANWPLS LQTSLSILLN TACPMVLVWG 
RDRYLFFNDG YANLGLNSGP TLIPGQPLHN CSQPNGGELL TAIEQVFTTA QPQQQVLASQ
GMSGEQLWLW CFSPLWDGGQ VGGVFATGCA ELNPIAGTTK LEAECRQVET ERQHLSEALL
SEKARFEAVL RQLPEGVMIA DAATGNLILT NERADQLMRH SYALDFQLEA YESWVPFQAY
RTNGQRYAPE DYPLVRSLRQ GEIIAHEEME LRFADGSQIF IDVNAAPILD YQGQITSAVT
VFQDISERKQ LEAERQQALI QLQERQHFIQ QVADATPGTL YVYDMVAQRN IYVNRQIGEL
LGYTPADIQA YDDQLFAQLI HPEDLATIGN QYTRLNQAQA DEVIDYEYRM RHANGEWRWL
WSRNTVSTRT PEGLAHLVVG TVQDITDRKQ AELALQQTQV HLQRANERFE LAAKAVNCLI
YDWDVEQDRV ERTEGFTRLL GYSLEEAEPT GAWWRQQIHP EDVQRLSATA ISNLLNNDLQ
ICEYRVRTKD NRYIYVLDQA LVVCRDAKGY PTRMVGSTTD ITDRKRAEAQ LQQQEQEFRT
LVENTPDVII RYDRNLRYLY INPSIERIIG IPPEQLIGKT GIELGLIDPT SQAWYRTLEQ
VFNTGQHHWL EFEFPNPEGE LHAYQARFVP ELVEGEQITT VLAVATDVTE YKRTELLLRQ
SEERLRLAMA AAQMATWDVD LNTGKAFWSE HHFTMLGYEP VAGGEASEAM WSSCIHPEDL
ERVLQAWQQA RLDRTLYRAE YRVIRVDNGQ IAWLMGLGSF TYDETGQAIR SIGVLLDISE
QQAALQERKR VEDELRESEQ RLQLAQQAGR IGTWDWNLLT NEVSWSDGIW PLLALEPKSV
KPDLETFTHF IHPEDREQAF RTVKLALAEG DDYYDEFRVI RQDGAICWLL SKGRVIRTPE
GQPQRLLGIN VDITDRKQAE EALRQSEERL RLALLVSQSG IWDWDIVNKQ ITWSERIYQF
HGLTPDTFGG TVAEFAALIH PEDRERVAAA IQRALAGESS YELEFRAVQP SGAIRWLSTT
GGVIFDQQGQ PVRMLGATND ITDRKAIEAE RERLLLSERR CREAAESANR IKDEFLAVLS
HELRSPLNPI LGWTKLLQTR PFDPQRTQQA LQTIERNAKL QTQLIEDLLD ISRILQGKMV
LNTSPVNLIT TIEAALDTVR LAAETKGIEL QTCLSPAVGR VYGDSTRLQQ IVWNLLTNAV
KFTPAGGKVL IRLEQVDSFA QIQVQDTGKG ISPAFLPHVF EYFRQEDSQT TRKFGGLGLG
LAIVRYLTEQ HGGTVEVESR GEDQGASFTV HLPLMASDLT PDPAEQPCIE TAQDLRGLQI
LIVDDDADMR DLLSFILTEQ GATVRVAASA SEGLQHLSAS PLDLDLLISD IGMPEMDGYS
LIRQARHLLA PTGKELPAIA LTAYAGEINQ QQALAAGFQL HLAKPIEPDQ LLIMIKNLVF
S