Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_1704 |
Symbol | |
ID | 7287628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | + |
Start bp | 1544677 |
End bp | 1545852 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643584704 |
Product | integrase family protein |
Protein accession | YP_002482434 |
Protein GI | 220907123 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.01743 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0235893 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAAGCA AAGTTAGTGC CATCAACGCC AAGCGGAATA AGGGGAGTGT AGGGGTTGAG TCATTCCAGG GTAGATTACG CTTGCGACTG CCCAGAGAGC TTTATGGGGG AAAACAAAAG TACCTCACAT TGGGATTAGA CGATACCCAT GAAAATAGGA AGCTGGCAGA GGCTAAGGCA AGCCAGATAG AAGCTGACAT CGCCTATGAA CGATTTGACC CTACCCTGGC AAAGTACGGT AAAAAACAGC CACACCTAGC CGTTGTGCCA CAGATCGAAC ATGGTCACAC AACTGGTCTT AAAGACCTCT GGCAGCAATT TTGTGAGTAT AAAGCTACTG TTCTGAAGCC CAAATCACTT TCTGAGTACA AAGATATTAC TAAATTAATT AATCGTGTTT CAAATGACTT AGACCCATTA ATTGTTCGAG CTGAATTGCA GAAGATGACA ACGAATAATA GAGCAAAAAA AGCTCTGATG CTGATTTCAG CAGCTTACAA GTGGGGAATG AAACACAATA AAGCTTTTGA TAATCCCTAT GATGGTATGT ATAGGGAGCT GCCCAAATTC AGCTATAAAG AAGAACCTAA TCCTAATCCT TTTACTGCTG AAGAAAAGCA AAAAATCTTA GAAGCCTTCG CTAATCATGG CAAAGGGAAA AAGGGTATCT CTTATTCCTA CTATTATCCA TTTGTTAAGT TTCTGTTTAT GACTGGCTGT AGACCCTCGG AAGCCATTGG ACTGCAGTGG AAAAACATTA GCTCTAATTT CAATAAGATT GTATTTGATG GTTCGGTTGT ACTTGTGGAA GGTAAACACG TTAGGCAGAA AAGGTCTAAA AATAATAGAA CTAGAACCTT TCCCTGTAAT GATGAATTGC AGGAATTCCT GAAATCGATT AAACCTACAA ATTGCAGTCC TGAAAATTTA GTGTTTCCCA GTAGAGACGG TATGTATATT AGGTACAATG ACTTTTCTCG TAGAGCATGG CATACCATTG TTGATCCGAT ACAAGCTGAT ACTACTCCCT ACAGTTGCAG AGATACCTTT ATTACAGAAC AGGTATCTAA AGGTATCAGT GATGTGATTG TGGGCAAATG GTGTGATAAC AGCCCTGAGA TGATTAGGAA GCACTATTTC GGAGATAAGG TAATCGAACA GATTGTGCCT CTCTAA
|
Protein sequence | MQSKVSAINA KRNKGSVGVE SFQGRLRLRL PRELYGGKQK YLTLGLDDTH ENRKLAEAKA SQIEADIAYE RFDPTLAKYG KKQPHLAVVP QIEHGHTTGL KDLWQQFCEY KATVLKPKSL SEYKDITKLI NRVSNDLDPL IVRAELQKMT TNNRAKKALM LISAAYKWGM KHNKAFDNPY DGMYRELPKF SYKEEPNPNP FTAEEKQKIL EAFANHGKGK KGISYSYYYP FVKFLFMTGC RPSEAIGLQW KNISSNFNKI VFDGSVVLVE GKHVRQKRSK NNRTRTFPCN DELQEFLKSI KPTNCSPENL VFPSRDGMYI RYNDFSRRAW HTIVDPIQAD TTPYSCRDTF ITEQVSKGIS DVIVGKWCDN SPEMIRKHYF GDKVIEQIVP L
|
| |