Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_1678 |
Symbol | glyA |
ID | 7287601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | - |
Start bp | 1524450 |
End bp | 1525730 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643584677 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_002482408 |
Protein GI | 220907097 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTCGTA CGAATCTAGA TTTTTTAACT GAAACTGATC CGGCCATTGC TGGCTTGCTC CAACAAGAAC TGCAGCGGCA GCAGGATCAC CTGGAACTGA TTGCCAGTGA AAACTTTACC TCGGCAGCAG TGCTGGCAGC TCAGGGTTCC GTCCTGACCA ATAAGTATGC GGAGGGGTTA CCGGGCAAGC GGTATTACGG GGGCTGCGAA TATATCGACA AGGTGGAACA ATTGGCCATT GATCGAGCCA AGGACCTGTT TCAGGCAGCC CATGCCAATG TCCAGCCCCA CTCCGGTGCC CAGGCTAATT TTGCTGTATT TCTGGCCCTG CTCCAACCCG GTGACACGAT CATGGGGATG GATCTCTCCC ACGGCGGCCA CTTAACCCAC GGCTCTCCCG TCAACGTTTC GGGCAAATGG TTTCGAGTGG TTCACTATGG CGTTGATCCT GTGACGGAGC AACTGGACTA TGAAAAAATT CGCCAGCTTG CCCATCAGCA TCGGCCCAAA TTAATCATTT GTGGGTATTC TGCCTATCCC CGCATCATTC AGTTTGACCA GTTCAGGGCG ATCGCCGATG AAGTGGGAGC TTATCTGTTG GCGGACATGG CCCATATTGC CGGATTGGTC GCCACGGGTC ATCACCCTAG CCCCATTCCC GTCTGCGATG TTGTCACCAC CACCACCCAC AAAACCCTGC GCGGTCCTCG CGGGGGTTTA ATTCTCACCC GTGATCCAGA GTTGGGCAAA AAACTGGATA AAGCGGTCTT CCCCGGCAAC CAGGGGGGGC CCCTCGAACA TGTCATTGCC GCTAAAGCCG TGGCCTTTGG TGAAGCGCTC CGCCCGGAAT TCAAAACCTA TTCCGCTCAG GTGATCAAAA ATGCCCAGGC GCTCAGTCAG CAACTCCAGC AGCGGGGATT CAAGATCGTT TCCAATGGCA CTGATAATCA TCTATTATTG GTGGACCTGC GTTCTATCGG GATGACGGGC AAACTTGCTG ATCAATTAGT GAGCGAAGTC AACATTACCG CCAATAAGAA CACCGTTCCC TTTGATCCCG AATCGCCCTT TGTCACCAGT GGCTTAAGGC TCGGTTCAGC AGCCATGACC ACCCGTGGCA TGGGAACCCC AGAGTTCATA GAGATTGCTA ATATCATTGC CGATCGGCTG CTGAATCCTG AAGATCTTGC TATTGTTCAA GAGTGCCGGC AGCGTGTTGC TCAGTTGTGC GATCGCTTTC CGCTCTATCC CCATCTCAGT CGCGTGCCTG TTCTGTCCTA A
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Protein sequence | MTRTNLDFLT ETDPAIAGLL QQELQRQQDH LELIASENFT SAAVLAAQGS VLTNKYAEGL PGKRYYGGCE YIDKVEQLAI DRAKDLFQAA HANVQPHSGA QANFAVFLAL LQPGDTIMGM DLSHGGHLTH GSPVNVSGKW FRVVHYGVDP VTEQLDYEKI RQLAHQHRPK LIICGYSAYP RIIQFDQFRA IADEVGAYLL ADMAHIAGLV ATGHHPSPIP VCDVVTTTTH KTLRGPRGGL ILTRDPELGK KLDKAVFPGN QGGPLEHVIA AKAVAFGEAL RPEFKTYSAQ VIKNAQALSQ QLQQRGFKIV SNGTDNHLLL VDLRSIGMTG KLADQLVSEV NITANKNTVP FDPESPFVTS GLRLGSAAMT TRGMGTPEFI EIANIIADRL LNPEDLAIVQ ECRQRVAQLC DRFPLYPHLS RVPVLS
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