Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_1584 |
Symbol | |
ID | 7287507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | - |
Start bp | 1434559 |
End bp | 1435542 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643584584 |
Product | RNA polymerase sigma factor |
Protein accession | YP_002482315 |
Protein GI | 220907004 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0418085 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTACTC TAAAAACCAA AACTCAGACC CGTGACTCGA TGGTCAGTAC CGACATGGTT CGCACCTATC TGCACGAGAT TGGGCGTGTG CCGCTGTTAA CCCACGAGCA GGAAATTGTT CTGGGTAAGC AGGTACAGCA ATTAATGGAA CTGCTGGAAG CACGGGAGAA ACTGACCACC AGTCTTGATC GTTCCCCCAC GGCGGAGGAA TGGGCTGAAC AGGCCAATTT GAGTGTGGCC GACCTGAACA CTGCAGTGCG ACGGGGACAG CGCGCTAAAC AGAAGATGAT TGAAGCCAAC CTGCGCCTGG TGGTTTCCGT AGCCAAAAAA TACCAGAAGC GCAATCTGGA ACTGCTGGAT CTGATTCAGG AAGGAACCCT TGGGCTGGAG CGAGGGGTAG AAAAGTTTGA TCCCACGAGG GGTTATAAAT TCTCCACCTA TGCTTACTGG TGGATCCGCC AGGCCATTAC CCGGGCGATC GCTCAGCAGG CTCGGACAGT GCGGCTTCCC ATTCACATCA CTGAAAAGCT GAACAAGATC AAAAAAGCTC AGCGGGTGCT CTCCCAGCGG TTGGGACGGA GCGCCACCCC AGCGGAAATT GCCCAGGAGT TGGAACTGGA ACCCTCGCAA ATCAGAGAAT ACCTCACCCT GGCCCGTCAA CCTGTATCCC TGGATCTGCG GGTGGGGGAT AACCAGGATA CGGAATTGCG CGATCTACTG GAAGATGACA GTCCTTCTCC CGAACAGTAC ACCACCGGTG AAGCCTTGCG GGATGATGTC AACCATCTCC TGGCCGAGCT GACGCCACAG CAACGGGAAG TCTTAACCCT GCGCTTTGGG CTGGAGGATG GCAAAGAGCT ATCCCTGGCT AAAGTGGGTG AGCAACTCAG TCTCAGCCGG GAGCGGGTGC GTCAATTGGA ACGGCAGGCG CTGGATCATC TCCGTCGGCG CAAATTGCAA GTGCGGGAGT ACCTGGCCAG TTAA
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Protein sequence | MSTLKTKTQT RDSMVSTDMV RTYLHEIGRV PLLTHEQEIV LGKQVQQLME LLEAREKLTT SLDRSPTAEE WAEQANLSVA DLNTAVRRGQ RAKQKMIEAN LRLVVSVAKK YQKRNLELLD LIQEGTLGLE RGVEKFDPTR GYKFSTYAYW WIRQAITRAI AQQARTVRLP IHITEKLNKI KKAQRVLSQR LGRSATPAEI AQELELEPSQ IREYLTLARQ PVSLDLRVGD NQDTELRDLL EDDSPSPEQY TTGEALRDDV NHLLAELTPQ QREVLTLRFG LEDGKELSLA KVGEQLSLSR ERVRQLERQA LDHLRRRKLQ VREYLAS
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