| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_1438 |
|---|
| Symbol | gatB |
|---|
| ID | 7287359 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | - |
|---|
| Start bp | 1275450 |
|---|
| End bp | 1276940 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643584438 |
|---|
| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
|---|
| Protein accession | YP_002482171 |
|---|
| Protein GI | 220906860 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
|---|
| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTACTG CTGCTCCGGC GAAAGTAAAA ACCCAGTACG AAGCGATCAT CGGGCTGGAA
ACCCACTGCC AACTGAAAAC CGCCACTAAA ATCTTCTGTA ACTGTTCGAC GGAATTTGGG
GCGGAACCGA ACCACCACGT CTGTCCGATC TGCATGGGTA TGCCCGGTGT GCTGCCAGTT
TTGAACCAGA CGGTGCTGGA ATACGCGGTC AAGGCGGGGT TGGCGCTCAA CTGTCAGATT
GCCGATTACA GCAAGTTCGA TCGCAAACAG TATTTTTATC CCGATCTGCC CAAAAATTAT
CAGATCTCCC AGTACGACCT GCCCATTGCC GAACATGGCT GGTTAGAAAT TGAACTGGTG
GATGCTCAGG GCGAACCTGT CCGCAAAAAG ATTGGCATCA CCCGTCTGCA CATGGAAGAA
GATGCGGGTA AGCTGGTTCA CGGGGGCAGT GAGCGGCTAT CGGGTTCCAC GTTTTCCCTG
GCAGACTATA ACCGGGCGGG GGTGCCCCTC TGTGAAATTG TCTCGGAGCC AGATTTGCGA
TCGGGGGTGG AAGCGGCGGA ATATGCCCAG GAATTGCGGC GGATTTTACG TTACCTGGAA
GTCTGTGATG GCAACATGCA GGAGGGGTCA CTGCGTTGTG ATGTGAACGT CTCGGTGCGG
CCGGTGGGTT CCGACAAGTT TGGCACCAAG GTCGAAATCA AAAACATGAA CTCCTTTAAT
GCCATCCAGC GGGCGATCGA CTACGAAATT GAGCGCCAAA TTGCCCAGTT GGAAGCGGGT
GGACGGATCG TGCAGGAAAC ACGGCTTTGG GATGAAGCCA GCCAGCAAAC CATCAGCATG
CGGGTGAAGG AAGGCTCCAG TGATTATCGC TACTTCCCGG AACCAGACTT AACCCCGATC
GAAGTGAGTG AAGAGCAACT TGATCAATGG CAGTTGCAAT TACCCGAACT ACCGGCGCAG
AAACGGCATC GCTATGAATC AGAACTGGGA CTGTCTGCCT ATGATGCCAG AGTGCTGACG
GACGATCGCC CCGTTGCCCT GTACTTTGAA GCCACCGTTG CCCAGGGTGC CAATCCCAAG
CAGGCGGCCA ACTGGATCAT GGGGGACATC ACCGCCTACC TCAAAACGGA AAAACTTGCG
ATCACCGATT TACCCTTATC CCCCACCGGA CTGGCGGAAC TGATTGGCTT GATTGAAGCG
GGAACGATCA GCAGCAAAAT TGCCAAAGAC CTGCTGCCGG AATTGCTGGC TGAAGGAGGA
TCGCCCAAGG CTCTGGTGGA GCAGAAGGGC TTGACCCAAA TCTCTGATTC CAGTGCCCTG
GCTGGTTTAA TTGATCAGGT GCTCCAGGAT CATCCCCAGG AACTGGCTCA GTATCGGGCC
GGCAAAACTA AACTGCAAGG TTTCTTTGTG GGTCAAATCA TGAAACGTTC CGGGGGGCGG
GCCGACCCCA AGCTGACAAA TCAACTCCTG GCTGAGAAAC TAAAAGGATA A
|
|---|
| Protein sequence | MTTAAPAKVK TQYEAIIGLE THCQLKTATK IFCNCSTEFG AEPNHHVCPI CMGMPGVLPV
LNQTVLEYAV KAGLALNCQI ADYSKFDRKQ YFYPDLPKNY QISQYDLPIA EHGWLEIELV
DAQGEPVRKK IGITRLHMEE DAGKLVHGGS ERLSGSTFSL ADYNRAGVPL CEIVSEPDLR
SGVEAAEYAQ ELRRILRYLE VCDGNMQEGS LRCDVNVSVR PVGSDKFGTK VEIKNMNSFN
AIQRAIDYEI ERQIAQLEAG GRIVQETRLW DEASQQTISM RVKEGSSDYR YFPEPDLTPI
EVSEEQLDQW QLQLPELPAQ KRHRYESELG LSAYDARVLT DDRPVALYFE ATVAQGANPK
QAANWIMGDI TAYLKTEKLA ITDLPLSPTG LAELIGLIEA GTISSKIAKD LLPELLAEGG
SPKALVEQKG LTQISDSSAL AGLIDQVLQD HPQELAQYRA GKTKLQGFFV GQIMKRSGGR
ADPKLTNQLL AEKLKG
|
|---|
| |