Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_1398 |
Symbol | |
ID | 7287318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | - |
Start bp | 1233838 |
End bp | 1235352 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643584398 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_002482132 |
Protein GI | 220906821 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.463842 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTACCC AATTACCGCC TCTGGATCAT CCCCGCCCCT GGTCTCCATC CCTGCTCAAA CGGTTGCGTT CCCCCTGGCT GATCACGTTA CTCCTGCTGG CCGGGATGAC TGGGGGGGGC TTAACCCTCT ACCGCACGCT CTCCCTACCT CAAGCAGGGC AAAGCCAGCT TCTGACTGCC AGGGTGGAGC AAAAATCCCT GCCCATTACC TTTGCGGCCA ATGGCACCGT CAAGCCGGCC CGGACCATTA ACCTCAGTCC CAAAACGGCG GGCTATCTCC AACAGTTGCT GGTGCAGGAA GGCGATCGGG TCCAGGCGGG GCAAATTGTC GCTTATATGG ATAACTCTAA TCTGCAGGGA CAACTAACCC AGGCCCGGGC CCAACTGGCT CAACAGGAAG CCAATCTGGC TAAACTGCTC AACGGCAACC GTCCCCAGGA TATTGCCCAG GCCACAGCTC AACTCCAAGA AGCCCAGGCC CGCCTACAGC AATTGCAGGT TGGCAATCGA CCGGAAGACA TTGCCCAGAC CCAGGCTCAG TTAGCGTCTG CTCAGGCCAA CCTCCGTCAG GCGGAAGATG ATTTACAGCG CAATCAAAGC CTGCTAGCGG AAGGGGCGAT CTCCCAACAG ACGGTGATCC AGAAACGCTC CACTCGGGAT GCGGCCCAGG CGGCGGTCAA TCAGGCCCAG GCAGCTTTAA GACTACAACA ACGGGGTAGC CGTTCCGAGG AAATTGCTCA GGCTCAAGCC CTGGTGGAAC AACGCCGTCA AGCCCTGAGT TTACTGCAAG CGGGTAGCCG CGCTGAAGAC ATCCAGGTGG CCCGTGCTCA GGTAGAGGCG GCCCGAGGGG GACTGCAAAC CCTGCAAACC CAACTGGAAG ACACGGTGAT TAAAGCTCCC TTTACCGGAG TGGTGACGAA AAAATACGCC GATCCGGGCT CATTTGTCAC ACCCACCACA GCGGGGAGTG GGGCCGAGGG AGCAGCCTCG AATTCGATCT TGACCCTGGC CGCCACCAAT CAGGTCGTTG CCTATCTGGA TGAAGCCAAA ATTGCCCGGA TTAAGGTTGG CCAGCCGGTG AATATCACAG CCGATGCCTA TCCCGATCGC CGGTTTAGTG GCAAAGTCAG TCAGATTGCT GCTCAGGCCA CCACCACCCA GAATGTCACC AGCTTTGAAG TGAAAGTTGA CCTGGAACCG ACGGCCCAAC AATTGCTGCG TGCCGGTATG AATGTGGAAG CGGAATTTCA GGTCGGACAA CTGAACCGGG CGATTCTGGT CCCCTCCGCC GCGATCGTGT GTCAGCCTAA CGGTACGACA GGGGTGTATG TCCTGGGAGC GGATCAGCAA CCTCAGTTTC GCCCCATTCA GATCGGCCTA ACCCTGGGCA ATCAAACCGA AGCCAGGAGG GGTCTACAGG GCAGTGAGCA GGTTTTGATC AGCTTTCCAC CTGGAATGGA ACCCAAATCC GATGTACGTG GCCCTTTTCC CGGTCTGGGT AGAAATCGAA GGTAA
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Protein sequence | MATQLPPLDH PRPWSPSLLK RLRSPWLITL LLLAGMTGGG LTLYRTLSLP QAGQSQLLTA RVEQKSLPIT FAANGTVKPA RTINLSPKTA GYLQQLLVQE GDRVQAGQIV AYMDNSNLQG QLTQARAQLA QQEANLAKLL NGNRPQDIAQ ATAQLQEAQA RLQQLQVGNR PEDIAQTQAQ LASAQANLRQ AEDDLQRNQS LLAEGAISQQ TVIQKRSTRD AAQAAVNQAQ AALRLQQRGS RSEEIAQAQA LVEQRRQALS LLQAGSRAED IQVARAQVEA ARGGLQTLQT QLEDTVIKAP FTGVVTKKYA DPGSFVTPTT AGSGAEGAAS NSILTLAATN QVVAYLDEAK IARIKVGQPV NITADAYPDR RFSGKVSQIA AQATTTQNVT SFEVKVDLEP TAQQLLRAGM NVEAEFQVGQ LNRAILVPSA AIVCQPNGTT GVYVLGADQQ PQFRPIQIGL TLGNQTEARR GLQGSEQVLI SFPPGMEPKS DVRGPFPGLG RNRR
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