| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_1292 |
|---|
| Symbol | rplC |
|---|
| ID | 7287213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | + |
|---|
| Start bp | 1128592 |
|---|
| End bp | 1129230 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643584296 |
|---|
| Product | 50S ribosomal protein L3 |
|---|
| Protein accession | YP_002482030 |
|---|
| Protein GI | 220906719 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0087] Ribosomal protein L3 |
|---|
| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000167398 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGTCG GTATTTTGGG GACAAAGTTG GGGATGACTC AGATCTTCGA TCAGGAGAGA
CGGGCCATTC CTGTGACGGT TGTACAGGCC GGCCCCTGTC CCATCACCCA GATTAAAACT
AAGCAAACTG ACGGCTATGC AGCGATTCAG GTTGCTTTTG GTGAAGTTAG AGCAAAGTCC
TTGAGCAAAG CCGAACTGGG ACATCTGGCT AAATCGAACA CCGCACCCAT GCGCCACCTG
CACGAGTATC GCACCGGGGA GGTCGACCAA TTTCAAGTGG GTCAAGTTTT AAAAGCTGAT
CTGTTTAGTG CTGGCCAGGT TGTAGATGTA ACTGGCACCA GTATTGGTCG GGGTTTTGCG
GGATACCAAA AGCGGCATAA CTTCAAGCGC GGACCTATGG CTCACGGTTC TAAAAACCAC
CGGCTTCCCG GTTCGACTGG CGCAGGTACA ACCCCCGGAC GGGTTTATCC TGGCAAGCGG
ATGGCTGGAC AACTAGGCAG TGCCCGCACC ACGATTCGTC AGTTGACGAT CGTTCGTGTC
GATCCAGAAC GCAACCTGGT TTTAATTAAA GGAGCGGTTC CGGGCAAGCC AGGGGCTTTA
GTCAGCATTA CTCCTGCCAA CTCTGTTGGT CGTAAGTAA
|
|---|
| Protein sequence | MAVGILGTKL GMTQIFDQER RAIPVTVVQA GPCPITQIKT KQTDGYAAIQ VAFGEVRAKS
LSKAELGHLA KSNTAPMRHL HEYRTGEVDQ FQVGQVLKAD LFSAGQVVDV TGTSIGRGFA
GYQKRHNFKR GPMAHGSKNH RLPGSTGAGT TPGRVYPGKR MAGQLGSART TIRQLTIVRV
DPERNLVLIK GAVPGKPGAL VSITPANSVG RK
|
|---|
| |