Gene Cyan7425_0997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_0997 
Symbol 
ID7286915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp808868 
End bp810607 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content47% 
IMG OID643584007 
ProductMscS Mechanosensitive ion channel 
Protein accessionYP_002481744 
Protein GI220906433 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3264] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00010123 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.396482 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATTT CTTATCGTCA TAAACGATGG CTGTTAAAGG GGTTCTTCGG GCTAATTGCC 
GTGCTGTTCA TTGTTTTGCT CACGGTCCAG GCCACTTACA GCCAGACGGA GTCTCCCTCT
GCTCAACCCT CTGCCCTCAT ACAACCAGCC CCGACAGGCA ATCCTCAACC CGGTGCAGAG
GCAGCGGTGC AATTGGGGGG GCAGAAAGTC TTTGTGTTCA CCAACAGAGT CGGGCCATTA
AACCCCGCAG AACGGGCTCG CATCGTTTCC GGTCGCTTGC AGGTCCTCGC TGAACAACCT
CAATTTCAGC CAGAGGATCT ACGCCTGGAA GAAGAAGAGG GCGGCATTAT CATTACCAAC
AATGACGAGG TTTTAACCAT CATTACCGCC GCCGATGCCA AAGCCGTCGA TCGCCCACTC
CCAGACCTGG CCAATGAACG CTTAGGCCAA ATTAAGCAAG CCATCCGACA GTATCGAGAA
GATTACAGTC TGCAGAGTTT AGCTAAAGCC TTACTATCCA GCGCACTAGC AACTGTGTTA
CTGGGGTTAG TTCTCAGGTT CTTCTTTTGG GCATTTAGAA AGCTCTTGAA GGCGATCGAC
TCCCCCCAGG TCAATCGTTT TCTGGTCTTA AGATTCAATG ATGTCGAGCT AGTCCCCGTA
GCCTGGACTC GCAATGCCAT GCTAGGGTCG CTTAAATTTA TTCGCTTTAT CCTACTCCTG
AATATTCTCA ATATTTATAT TATTTTTGTT CTCCGTTCTC TCCCCTGGAC AAAGTATTTT
GCAGTTTCCT TACTCGGCTA TATTCTCACC ATTCTGCAAC AGGGATGGCA AGCATTTATA
GACTATCTCC CTAATCTGCT CTCCATCATT GTGATTGGTG TGATCACTTA TTATTTGATT
AGCTTTACCA AAGTAATTTT TAACGAACTG GCTAAGGGTG GCTTAAGCAT CCCTGGTTTT
TATCCTGAGT GGGCCGAACC CACCTATAAA CTGGTCTTAT TCTTAACCCT GGCTACAGCG
GCTGTGGTGA TTTCCCAATA CTTACCCGGC TTTCGTTCAC CCGCAGCACA GGGAATTTCT
ATCTTCTTTG GGGTTTTGTT GTCTTTAGGA GGAGCTTCTT CCGTCGCCAA TATCGTCAGC
GGTGTAATTT TAATCTATAC CCGTGCCTTC CGAGTGGGAG ATGTGGTCAA CATTAATGAC
GTAATGGGAG AAGTGATCGA AAAAAGTCTC CTGGTCACCC GGATTCGGAC TCCCCACCAG
GTGGTTGTCA CTTTTCCTAA TAGTGCAGTA GCAACTTCTC TGATTAGAAA TTTTTCCATC
TCCGCGCAGG AAGAAGGAAC GGGCTTGATT TTGCAAACAA CTATCACACT TGGCTACGAC
ATTTCCTGGA GAAAGGTGCA TCAAACCCTA GTCGAGGCTG CTCTTAGAAC AGGGGAAATT
TTATCAGAAC CCCAGCCCTT TGTGTGGCAA ACCAGCTTAA ATGACTTCCA TATCAGTTAT
CAACTGAATG CCTTTACTCG GAGTCCCAAG CGTATCCCGT TTATTTATTC AGAACTACAT
CAGCATATCC AGGATTGCTG CAATGAGGCC GGAATTGAAA TTCTCTCTCC TGCTTACTCT
TCTTTGCGGG ATGGCAACCC CAGCACCATT CCAGCTTCTT ACCTGCCCAA TAACTATATT
GCTCCCGGCT TTAATTTGAC AATCGGGCAG CAACCTCACC CCCCCCAGAA GAACAATTAA
 
Protein sequence
MQISYRHKRW LLKGFFGLIA VLFIVLLTVQ ATYSQTESPS AQPSALIQPA PTGNPQPGAE 
AAVQLGGQKV FVFTNRVGPL NPAERARIVS GRLQVLAEQP QFQPEDLRLE EEEGGIIITN
NDEVLTIITA ADAKAVDRPL PDLANERLGQ IKQAIRQYRE DYSLQSLAKA LLSSALATVL
LGLVLRFFFW AFRKLLKAID SPQVNRFLVL RFNDVELVPV AWTRNAMLGS LKFIRFILLL
NILNIYIIFV LRSLPWTKYF AVSLLGYILT ILQQGWQAFI DYLPNLLSII VIGVITYYLI
SFTKVIFNEL AKGGLSIPGF YPEWAEPTYK LVLFLTLATA AVVISQYLPG FRSPAAQGIS
IFFGVLLSLG GASSVANIVS GVILIYTRAF RVGDVVNIND VMGEVIEKSL LVTRIRTPHQ
VVVTFPNSAV ATSLIRNFSI SAQEEGTGLI LQTTITLGYD ISWRKVHQTL VEAALRTGEI
LSEPQPFVWQ TSLNDFHISY QLNAFTRSPK RIPFIYSELH QHIQDCCNEA GIEILSPAYS
SLRDGNPSTI PASYLPNNYI APGFNLTIGQ QPHPPQKNN