| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_0810 |
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| Symbol | |
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| ID | 7286726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7425 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011884 |
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| Strand | - |
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| Start bp | 627061 |
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| End bp | 629583 |
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| Gene Length | 2523 bp |
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| Protein Length | 840 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643583819 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_002481557 |
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| Protein GI | 220906246 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.643579 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.828908 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCAACG CAGGCCAAGC AATTGTGTTC TCTCACCCGT TCGATCCCCA ACCCCCAGAG
ACCGTCAAGG TAGGTATTCT CCACTCCCTC AGTGGGACGA TGGCCCTCAG CAGCGCTCCC
TTAGTCAAAG CAGCCCTGAT GGCGATCGCA GAAATCAATC AGTCCGGGGG AGTGTTGGGC
CGCAGAATTG AACCGATCGT CGAAGATGGC GCCTCCGATC CGGCCGTTTT TGCTACTAAA
GCCAGTCGTT TGATTGACCA GGAGCAGGTC TCAACGATCT TTGGCTGCTG GACCTCCCTC
AGTCGCAAAG TTGTCAAAGA GATTGTCGAA GCCAGGAATG TGCTGCTCTG GTATCCGATG
CAGTACGAAG GGCTGGAATG CTCCCCCAAC ATTTTTTATA CCGGCTCCTG TGCCAATCAA
CAGGTGGAAC CTGCTGTCAA CTGGTTGCTA CACCGCAATC GCAAGCGGAT TTTTCTGATC
GGTTCAGATT ACGTTTTTCC CCGCACCTTG AATCGAATCA TTGCTGGACA ACTGCAGCAA
CAGGGGGGCA CGGTGGCCGG TGAAGCCTAC CTTCCCCTTG GCGATCGGGA TTTCAGCAAA
ATTCTGCAGC AAATTGTCTA CCTGCAACCC GAGGCGATCT GCAGTACCCT CAATGGCGAG
AGTGGACTAT ACTTTTATCC CCAGTTTCAA GCCGCGGGCT TCACCCCTGC CCAGATCCCG
ATTATGGCCC TGAGTATGGG CGAAAACGAA TTTCAAGCCA TTGGGGCAGC GGCGATCGGT
CACTACGCTA GCTGGAGTTA TTTTCAAAGC ATTGATACCC CAGCCAACCA GCGTTTTGTC
GAAAACTTCC GGGCCTACTG CGGTGCCAAT AGTGTCACCA ATGATCCGAT CGAAACCGCC
TACACCCAGA TTTACCTCTG GAAGCAGTCT GTAGAAACCG CCCAATCCTT TCAGGTCAAT
AAAGTCCGGC AAGCCGCTTA CGGTCAAACC TTTACAGCCC CAGGTGGACT GATTAAAATC
GCCACCAATC ACCACGTCTG GAAAGCCTGC CGGATCGGCC AGTACGGTAG TGACGGACAG
TTCAAAATTG TCTATGAAAC GGATGCTCCC CTTCCTCCGT TACCCTGGCT AGGAGTGGAA
ACGAAAGATG CCAGCCGCTC CAGCACAGTG ATTAAATTGC TAGAAGAAGT ATCCCAGGGG
ATTCACTATA GCTGGCAACT GGAACAAAAA TCCCGCCAGC TGGAAGCGGC CCTGCATCAA
CTTCAGGAAG AAACCCGACA ACGGACTCGC TTGGAAGCCG AACGGCAGCG GTCAGAAATT
GCCTTAAGGG AATCAGAGGA ACGCTATCGC AGTATTTTTG AACGGGCAGT GGAAGGTATT
TTTCAAACCA CTTTAACAGG GGAGTATCTA CAGGTTAATC CATCCCTCGT AAAAATTTAT
GGCTATGGTT CCGCCCAAGA CCTAATCGAG CAATTGCAGG CTGAGCAGCT TTATGTTGAT
CCCAACCGTC GCCAAGAGTT TATCCGCTTG ATGGAGGAAC AGGAAGCAAT CTCGAACTTT
GAATCCCAGG TCTACCGCAA AGATGGTAAG GTGATCTGGA TTGCCGAACA TGTCCGCCTG
ATCAGAGATG CGGAGGGCCA TCCCCAGTAC TACGAAGGCA CGGTTCAGGA TATTACCGAG
CGCAAGCGAA CGGAACTAGC CCTGGCGGAG GCCAACCAGC AAATTACGCG GTTAAATGAG
CAATTACAGG AAGAAAACCT GCGCCTGGGG GCAGAGCTGG AAATTACTCG CCGCTTACAG
AAAATGATCC TGCCCAAAGC AGAAGAACTA CAGGCCATTC CCCATCTGGA TATTGCCGGC
TTTATGGAAC CTGCGACGGA AGTAGGGGGA GACTATTACG ACGTTTTACA GCACAATGGT
AGGATTAAAA TCGGAATTGG GGATGTGACG GGACACGGCT TAGAAAGTGG CTTAATGATG
CTGATGGCTC AAACCGCCGT GCAGACACTG TTAACAGTAG AGGAAACCAA TCCGGTTGCA
TATCTGAATG TGATCAATCA AATCCTCTAC AAGAATGCCC GTCGCATGTG CTCTGGTAAG
AACATGACTC TGTCCCTGCT GGATTATGAA CCCCTGGCTG CTTCGGGACG ATTGCGCCTG
AGTGGACAAC ATGAAGAATT AATTATTGTG CGTCGCAATG GCGAGATTGA ACAAATTGAT
ACCCTCGATT TAGGGTTTCC CCTGGGACTG GAATTCGATA TTTCTGGCTT TATTGCCCAG
ACGGAAGTAG AACTGCACCC AGGGGATTTA GCCGTCCTTT ATACCGATGG CGTCACCGAA
GCGTTTAACA GCCAAAATCA ACCCTATGGT CTGGAGAGAT TGCGCCAGGT TTTACAGGAG
AATCGGGATC ATTCGGCGGC AGAAATTCAG CGAATTGTAG TTGAAGATTT ATTGAATTAT
GTTGGTGAAC AGAAGGTTCA TGATGACATT ACCCTGTTGA TTATTAAGCA AAAGGATAGG
TAA
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| Protein sequence | MVNAGQAIVF SHPFDPQPPE TVKVGILHSL SGTMALSSAP LVKAALMAIA EINQSGGVLG
RRIEPIVEDG ASDPAVFATK ASRLIDQEQV STIFGCWTSL SRKVVKEIVE ARNVLLWYPM
QYEGLECSPN IFYTGSCANQ QVEPAVNWLL HRNRKRIFLI GSDYVFPRTL NRIIAGQLQQ
QGGTVAGEAY LPLGDRDFSK ILQQIVYLQP EAICSTLNGE SGLYFYPQFQ AAGFTPAQIP
IMALSMGENE FQAIGAAAIG HYASWSYFQS IDTPANQRFV ENFRAYCGAN SVTNDPIETA
YTQIYLWKQS VETAQSFQVN KVRQAAYGQT FTAPGGLIKI ATNHHVWKAC RIGQYGSDGQ
FKIVYETDAP LPPLPWLGVE TKDASRSSTV IKLLEEVSQG IHYSWQLEQK SRQLEAALHQ
LQEETRQRTR LEAERQRSEI ALRESEERYR SIFERAVEGI FQTTLTGEYL QVNPSLVKIY
GYGSAQDLIE QLQAEQLYVD PNRRQEFIRL MEEQEAISNF ESQVYRKDGK VIWIAEHVRL
IRDAEGHPQY YEGTVQDITE RKRTELALAE ANQQITRLNE QLQEENLRLG AELEITRRLQ
KMILPKAEEL QAIPHLDIAG FMEPATEVGG DYYDVLQHNG RIKIGIGDVT GHGLESGLMM
LMAQTAVQTL LTVEETNPVA YLNVINQILY KNARRMCSGK NMTLSLLDYE PLAASGRLRL
SGQHEELIIV RRNGEIEQID TLDLGFPLGL EFDISGFIAQ TEVELHPGDL AVLYTDGVTE
AFNSQNQPYG LERLRQVLQE NRDHSAAEIQ RIVVEDLLNY VGEQKVHDDI TLLIIKQKDR
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