| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_0217 |
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| Symbol | |
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| ID | 7286122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7425 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011884 |
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| Strand | - |
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| Start bp | 22613 |
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| End bp | 24034 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643583225 |
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| Product | photosystem II 44 kDa subunit reaction center protein |
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| Protein accession | YP_002480974 |
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| Protein GI | 220905663 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01153] photosystem II 44 kDa subunit reaction center protein (also called P6 protein, CP43), bacterial and chloroplast
[TIGR03041] chlorophyll a/b binding light-harvesting protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0294116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.15214 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAACTT TATCTTCCCC GAAGAGGTAC TTCCCCGTGG TAACGCTCTC TAGTAGTTCA
ATAATGGCCG GCAACCGGGA TCAGGAATCC TCTGGTTTTG CCTGGTGGGC TGGAAATGCC
CGTTTAATCA ACCTTTCTGG TAAACTTCTG GGTGCTCACG TCGCCCACGC CGGGCTGATT
GTCTTCTGGG CAGGAGCGAT GACCTTATTT GAGGTAGCTC ACTTTACCCC AGAAAAACCC
ATGTATGAGC AGGGTTTAAT TCTGATCCCC CACATTGCTA CCCTCGGTTG GGGAGTTGGC
CCCGGTGGTG ACGTCACTGA TATCTTTCCA TTTTTTGTAG TTGGAGTTGT CCACCTGATT
TCCTCCGCCG TCCTTGGTCT GGGTGGAATC TACCATGCCA TTCGCGGACC CGAAACGCTG
GAAGAGTATT CCTCTTTCTT CGGCTATGAC TGGAAAGACA AGAACAAGAT GACCACCATC
CTGGGCTTTC ACCTGATTGT CCTGGGACTA GGTGCTCTTT TGCTCGTGGC TAAGGCCATG
TTCTTTGGTG GTCTCTACGA TACCTGGGCT CCTGGCGGTG GAGATGTCCG CCTCATCACC
AACCCAACCC TGAACCCAGC CACAATTTTC GGTTATCTGA CCCGTTCTCC CTTTGGTGGA
GATGGTTGGA TTGTCGGTGT CAATAACCTG GAGGATGTGG TCGGTGGTCA CATCTGGGTT
GGGCTGATCT GCATTGCTGG TGGGATCTGG CACATCCTGA CCAAACCTTT TGGTTGGGCT
CGTCGCGCCT TCGTTTGGTC TGGTGAAGCT TACCTGTCCT ACAGCTTAGG TGCTTTGTCC
CTCATGGCTT TTATTGCCTC AGCCATGGTC TGGTTTAACA ACACCGTTTA CCCCAGTGAA
TTTTACGGTC CCACCAACGC TGAATCCTCT CAGTCTCAGT CCTTTGTCTT CTTGATGCGG
GACCAAAAAC TGGGGGCAAA TGTGGCCTCT ACTCAGGGTC CAACTGGCTT AGGTAAATAC
CTGATGCGCT CTCCTACCGG CGAAATCATC TTTGGCGGTG AGACGATGCG GTTCTGGGAT
TTCCGTGGCC CCTGGCTGGA ACCTCTGCGC GGACCCAACG GCTTGGATCT GGACAAGATC
AAAAACGACG TTCAGCCCTG GCAAATTCGC CGTGCTGCTG AGTACATGAC TCACGCCCCG
AACGGTTCGA TCAACTCTGT AGGTGGGTTA ATCACTGAAC CCAACTCCTT CAACTACGTT
AACCCCCGTG CTTGGTTAGC TGGTTCCCAC TTCATCCTGG CTTTCTTTTT CCTGGTTGGT
CACCTCTGGC ACGCTGGTCG GGCGAGAGCG GCGGCGGCTG GCTTTGAGAA GGGAATCGAG
CGGGAAACAG AACCCGTGCT AGCTATGCCC GATCTGGACT AG
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| Protein sequence | MKTLSSPKRY FPVVTLSSSS IMAGNRDQES SGFAWWAGNA RLINLSGKLL GAHVAHAGLI
VFWAGAMTLF EVAHFTPEKP MYEQGLILIP HIATLGWGVG PGGDVTDIFP FFVVGVVHLI
SSAVLGLGGI YHAIRGPETL EEYSSFFGYD WKDKNKMTTI LGFHLIVLGL GALLLVAKAM
FFGGLYDTWA PGGGDVRLIT NPTLNPATIF GYLTRSPFGG DGWIVGVNNL EDVVGGHIWV
GLICIAGGIW HILTKPFGWA RRAFVWSGEA YLSYSLGALS LMAFIASAMV WFNNTVYPSE
FYGPTNAESS QSQSFVFLMR DQKLGANVAS TQGPTGLGKY LMRSPTGEII FGGETMRFWD
FRGPWLEPLR GPNGLDLDKI KNDVQPWQIR RAAEYMTHAP NGSINSVGGL ITEPNSFNYV
NPRAWLAGSH FILAFFFLVG HLWHAGRARA AAAGFEKGIE RETEPVLAMP DLD
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