Gene Cwoe_5592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_5592 
Symbol 
ID8736068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp5988235 
End bp5989116 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content76% 
IMG OID646506223 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003397372 
Protein GI284047032 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.865822 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGACA GCGACTGGCT GGCTGCGCGC TTCGAGACCG ATCGCACGCA CCTGCGCGCG 
GTCGCCTTCC GCATGCTCGG CTCGGTCAGC GAGGCCGACG ACGCGGTCCA GGAGGCGTGG
CTGCGGCTCG ACCGCGCCGG CGCCGACGAC GTGCGGAACC TGACCGGCTG GCTGACGACG
GTCGTCGCAC GCGTCTGCCT CGACATGCTC CGCTCCCGCA CCGCGCGCCG GGAGGAGCCG
TTCGGCCCGC ACGTCCCCGA CCCGCTCGTC GGCCGTGAGG ACCGCAGCGA CCCCGAGCAC
GAGGCGCTGC TGGCCGACTC GGTCGGGCTG GCGCTGCTGG TCGTGCTGGA GCAGCTCGAC
CCGGCAGAGC GCCTCGCCTT CGTCCTGCAC GACATGTTCG CGATGCCGTT CGACGAGATC
GCGCCGATCG TCGGGCGCTC TCCCGCCGCC GCACGCCAGC TCGCGAGTCG CGCCCGTCGC
AGTGTCCGCG GACAGGCGCC GCCGCCCGAC CCGGACATCG CCGAGCAGCG CCGCGTCGTC
GACGCGTTCC TGGCCGCCGC GGCAGGCGGC GACCTCGCGG CGCTGATGGA GCTGCTCGAC
CCCGACGTCG TGGTGCGCGT CGACCGCAGC GGGCTGCGCC CCGGAACCTC GCGCGAGATC
CGCGGCGCGG CGGCCGTCGC CGAGGTGGCG CTCTCCGGCG GCTCCCGGTT CGGCCGCTTC
GCTCGGCCGG CGCTCGTCAA CGGGACGGCG GGGATCGTCG CCGCAGCCGG TGACCGCGCG
TTCGCCGTCG CCGGCTTCAG CGTCGTCAAC GGCCGGATCG TCGAAATCGA CGTGGTCGCC
GGCCCGGCGC GCCTGCGCGA CCTCGACCTC GGCGACGCGT AG
 
Protein sequence
MDDSDWLAAR FETDRTHLRA VAFRMLGSVS EADDAVQEAW LRLDRAGADD VRNLTGWLTT 
VVARVCLDML RSRTARREEP FGPHVPDPLV GREDRSDPEH EALLADSVGL ALLVVLEQLD
PAERLAFVLH DMFAMPFDEI APIVGRSPAA ARQLASRARR SVRGQAPPPD PDIAEQRRVV
DAFLAAAAGG DLAALMELLD PDVVVRVDRS GLRPGTSREI RGAAAVAEVA LSGGSRFGRF
ARPALVNGTA GIVAAAGDRA FAVAGFSVVN GRIVEIDVVA GPARLRDLDL GDA