| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_5341 |
|---|
| Symbol | |
|---|
| ID | 8735813 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | - |
|---|
| Start bp | 5710409 |
|---|
| End bp | 5711623 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 646505969 |
|---|
| Product | ROK family protein |
|---|
| Protein accession | YP_003397122 |
|---|
| Protein GI | 284046782 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGGAGAG CTGCCCCCAG CGGGTCGTTG GCGTCGTTGC GGGATCGCAA TCGCCGCCTG
CTCGTCGACG AGCTTCGGCG GGCCGGGCTG ATCAGCCGCG CCGAGCTGGC GCGGCGGACC
GGGCTCTCCC GCTCGACCGT CTCGACGCTC GTCGCCGACC TGCAGGCGCA GGGCCTGGTA
GCTGAGCGGG AGGTCGACGG CGCCGGGCCT CAGGGCGGGC GGCCGCCCGT GCTGCTCAGC
CTCGAACGCG CCGCGGGCGT GGCGCTCGGG ATCGACTTCG GCAAGCGGCA CGTGCGTGTG
ATCGTCTCCG ACCTCGCGCA CACCGTGCTC GCCGACGTCG AGCGCCCGAT GGAGACCGAG
CAGAGCGCTC CGGAGGGGTT CGAGGTCGCG GTCGCGCTCG TTCATCAGGC GCTGGCGGAT
GCGGGAGTCG AACAAACCGA CGTGATCGGC GCCGGCATGG GCGTCCCCGG GCCGATCGAC
ATCTCCACCG GCGAGGTCGG CTCCTCGGCG ATCCTGCCCG GCTGGATCGG CCTGCGCCCG
CGAGAGGACA TGAGCGCCCG CCTCGGGCTC GCTGTCAGGG TCGAGAACGA CGCCAACCTC
GGCGCGCTCG CCGAGCTGAC GTGGGGTGCT GGACGCGACA CCCAGGACTT CGTCTACGTC
AAGGTCGCGA GCGGCATCGG CAGCGGCCTC GTGCTCGGCG GCCAGCTCTA CACCGGCGCC
GGCGGCATCG CGGGCGAGAT CGGCCACTCG ATGGTCGACG AGCGCGGCGC CGTCTGTCGC
TGCGGCAACC GCGGCTGCCT CGAGACGATT GCATCGACGC GGCAGATCCG CGAGCTGCTG
CGCCCCGCGC GCGGCGCCGA TCTCACGATC GAGGAGGTCA TAGCGCATGC CCGCGAGGGT
GACCGCGCGT CACGCCGGGT GATCGGCGAC GCCGCCCGCG CGATCGGCGT CGTCGTCGCA
CAAGTTTGCA ATGTCCTCAA TCCGGCGAAG GTCATCGTCG GAGGCGACCT CAGCGCAGCG
GGCGACGTCC TGCTCGATCC CCTGCGCGAC GAGGTCTCCC GCCATGCCGT TCCGGCGGCG
GGAGGGCATG TAGAGATCGT CCCAGGCGTG CTGGGGCGAC GTGCCGAGGT GCTTGGCGCC
GCGGCACTCG TACTGCGCGA CGTGGACGGC TTCACGTTCA ACGCACCGGG GGAGGTAACG
CACCAAGCCG GGTAA
|
|---|
| Protein sequence | MRRAAPSGSL ASLRDRNRRL LVDELRRAGL ISRAELARRT GLSRSTVSTL VADLQAQGLV
AEREVDGAGP QGGRPPVLLS LERAAGVALG IDFGKRHVRV IVSDLAHTVL ADVERPMETE
QSAPEGFEVA VALVHQALAD AGVEQTDVIG AGMGVPGPID ISTGEVGSSA ILPGWIGLRP
REDMSARLGL AVRVENDANL GALAELTWGA GRDTQDFVYV KVASGIGSGL VLGGQLYTGA
GGIAGEIGHS MVDERGAVCR CGNRGCLETI ASTRQIRELL RPARGADLTI EEVIAHAREG
DRASRRVIGD AARAIGVVVA QVCNVLNPAK VIVGGDLSAA GDVLLDPLRD EVSRHAVPAA
GGHVEIVPGV LGRRAEVLGA AALVLRDVDG FTFNAPGEVT HQAG
|
|---|
| |