| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_4499 |
|---|
| Symbol | |
|---|
| ID | 8734963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | - |
|---|
| Start bp | 4796824 |
|---|
| End bp | 4797804 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 646505126 |
|---|
| Product | Collagen triple helix repeat protein |
|---|
| Protein accession | YP_003396287 |
|---|
| Protein GI | 284045947 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0524945 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCAC GCTCGGTCTT CCCCCGCTCC GTCGCCGCCG TCTGCGTCGC TGCACTGCTG
TTCGGTGCGT CGAGCACTGT GTCGCCTGCG ACCGCCGCCA CCGACTCGTC ACGCGTCTAC
GCGTGCGTCG CCGGCAACTC GAAGACGTTG CAGCTGACGA CGAAGAACGC GCACTGCCCG
CGCGGCCAGA CGAAGATCGT GTGGAACGTC ACCGGCGTCG AGGGGCCGCG CGGACCGAAG
GGCGGCACGG GCTCCACCGG CGCGAGAGGC AACGCCGGCG CCAAGGGCGA CGTGGGCGCG
AGAGGCGACG CGGGCGCCAG GGGTGACGCC GGCCCGGCCG GCGCGGCCGG CCCGACCGGT
TCCGCGGGCG CGAACGGTGC CCCGGGCGAC GCCGGCCCGA CGGGCGACAC CGGTTCCGTC
GGTCCCGCGG GGCCGACGGG CGGCCCCGGC CTGACCGGTC CCCCCGGCCC CACCGGTCCC
GCCGGCCCGA CCGGTCCCGC CATGCTCATG AGCGGCGGCC CGGTGACAGT CAGCAGCGCG
CTCGGCGGCC TGCCGTTGGC CACCACGCTG CTCCCGGTCT CCGGCCTGCT CGGCTCCAGC
AGCTCCACCA ACACCACGTC CTACCCGCCG TCCAGCCTCG ATCCCGCGAT CATGGCGGCG
GCGCAGATCG TCCCGGCGAA CGTCACGATC ACCGGCTTCC GCTTCGCGTA CACGAACGCG
GTGGCGGCGT TCCCGTCAAG CACCCCCGCC TTCGAGGTCT CGCTGTACAT GGGCCCGCCC
GGGGGGCCGT ATTCCCAGAC GCCCGTCAGC TGCAGCCTCT TCGGCACGAG TCCGATGCAG
CTCGGGTACA CGGCTTCGTG CAGCGGCACC GCGTCGCTCG AAGTCTCGGC AGGCTCGATG
CTCTACATCG GCGTGGTCTC GACGACCGAC GAGTCGACGA CGTTCACGGG CCAGGTCACG
GCAGGCCTCA CCACGAACTG A
|
|---|
| Protein sequence | MSARSVFPRS VAAVCVAALL FGASSTVSPA TAATDSSRVY ACVAGNSKTL QLTTKNAHCP
RGQTKIVWNV TGVEGPRGPK GGTGSTGARG NAGAKGDVGA RGDAGARGDA GPAGAAGPTG
SAGANGAPGD AGPTGDTGSV GPAGPTGGPG LTGPPGPTGP AGPTGPAMLM SGGPVTVSSA
LGGLPLATTL LPVSGLLGSS SSTNTTSYPP SSLDPAIMAA AQIVPANVTI TGFRFAYTNA
VAAFPSSTPA FEVSLYMGPP GGPYSQTPVS CSLFGTSPMQ LGYTASCSGT ASLEVSAGSM
LYIGVVSTTD ESTTFTGQVT AGLTTN
|
|---|
| |