| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_2881 |
|---|
| Symbol | |
|---|
| ID | 8733325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | - |
|---|
| Start bp | 3076247 |
|---|
| End bp | 3077707 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | 646503494 |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_003394675 |
|---|
| Protein GI | 284044335 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAACC TGCTGCTGCG CCACCAGGAC GACCATCGCC TCTGCCAGCT CGTGCGAGCG
GGGCGTGAGG ACGCGTTCGA GGTGCTCGTG CGACGCTACC GGCGGCCGCT CCTGCGCCAC
TGCGAGCGCG TGGTCGGGGC CGATCGCGCC GAGGACGTGC TGCAGCAGAC GCTGCTGAAC
GCCCATCGCG GCATCGAGCG AGGCGACGAC GTCGGCGCGG TCGGGCCGTG GCTGCACCGG
ATCGCGCACA ACGCCGCCGT GTCCGCGCTG CGGTCGCTGC GGCCTGCCGT CGAGCCGCTC
GAAGCCGCCG AGCGCGCCGG AGCGGCGGTC GAGTCGGCAG CCGACGCGGC CGAGCGGCGC
GAGCGGCTGC GCGAGACCGT CGCGTCGGTC CAGAGACTTC CGCCGCGGCA GCGGGAGGCG
ATCCTGCTGC AGGTCGGCGA GCACCGCAGC TACGAGCAGA TCGCGGCCGA GCTGGGGCTC
ACGCCCGGTG CGGTGCGGCA GCTGCTGAAC CGCGCGCGCG GGACGCTGCG CCGGGGCGTG
ACGGCCGTGA CGCCGTTCGA TCTCGTGCTG CGCTGGGGTG CGCCGGAGGC CGAGGTCGCC
GGCGCCGTGG GCGCGCTCGG CGCGGCCGGC TCGGCCGGTG CGGTTGGTGC GGTCGGCGCA
GCGGCCGGCG GGGCCGGCCT CGTCGCCAAG GGCGCGGCCG TCGTCGTGCT GGTCGGGGCG
GGCGGCGTGG CTGCCACCTC GGCGGCGCGC GACCAGCGTC CGCCGGAGCG TCCGGCGCAC
GCCGCGGTCT CGGCGGGCGG CGCGCTCGGC ACCCCGGCGG CGTTCGCGCT GCCGAGCGGC
GGTGCGGGCC GGCCGGTGGG CGGCGTGGTG GGCGGTGGCG CTGAGCGAGA CGGTGCCGGG
CGGGATCGCG CCGGGCGGCG TTCTGCCGGG CGTGACGGGA GCGGTCCGCT CGCGGATCGG
CCGGCCGGAG GTCATCCACC CGCGGGCGGC GGATCGCCGG GCGGGACCGG CTCGCCGGGC
GGGAGTTCAC CCGGCGGCGG CTCTCCCGGC GGCGGCTTCC CCGGCGGGAG CGGCTTCCCC
GGCGGGAGCG GCTCCCCCGG CGGGAGCGGC TCCCCCGGCG CGAGCGGATC GCCCGGCGGT
GGGTTGCCGC CCACGGGCGG CGCTCCCGGG ACAGGCCCGG CGGATCCCAC GCCCAGCGGC
AGAGGCGCGC CCACACCCGA GCGGCCGCGC GAACCGAGCG ACGCCGACGA GCACGACGAG
CCGGACGACG CCGCCGATGC CACGCCGCCC GACCGCGACG AGACGGACGA CCCGCCGGCC
CCGCCGAGCG CGCCGGAACC TCCCGACGCC GACGATCCGC CCGACGTTCC CGCCGCCGAG
GAGCCGGAGC CGGCGGACGA GCAGCCGTCG CGCCCGGAAC CCGACGACGA CGTCGCGGCA
GACGTTCCTG ACGATGATTG A
|
|---|
| Protein sequence | MPNLLLRHQD DHRLCQLVRA GREDAFEVLV RRYRRPLLRH CERVVGADRA EDVLQQTLLN
AHRGIERGDD VGAVGPWLHR IAHNAAVSAL RSLRPAVEPL EAAERAGAAV ESAADAAERR
ERLRETVASV QRLPPRQREA ILLQVGEHRS YEQIAAELGL TPGAVRQLLN RARGTLRRGV
TAVTPFDLVL RWGAPEAEVA GAVGALGAAG SAGAVGAVGA AAGGAGLVAK GAAVVVLVGA
GGVAATSAAR DQRPPERPAH AAVSAGGALG TPAAFALPSG GAGRPVGGVV GGGAERDGAG
RDRAGRRSAG RDGSGPLADR PAGGHPPAGG GSPGGTGSPG GSSPGGGSPG GGFPGGSGFP
GGSGSPGGSG SPGASGSPGG GLPPTGGAPG TGPADPTPSG RGAPTPERPR EPSDADEHDE
PDDAADATPP DRDETDDPPA PPSAPEPPDA DDPPDVPAAE EPEPADEQPS RPEPDDDVAA
DVPDDD
|
|---|
| |