| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_2465 |
|---|
| Symbol | |
|---|
| ID | 8732908 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | + |
|---|
| Start bp | 2619870 |
|---|
| End bp | 2621096 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 646503081 |
|---|
| Product | putative RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_003394263 |
|---|
| Protein GI | 284043923 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00327105 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00432991 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGACGCCGC TGCCGGCAGG CGAGGTCGAA CGCGTCTTCC GCGCCGAGCA CGGCCGCGCG
GTCGCGGTGC TGGCGCGCAT CTTCGGCGAC CTCGACGTCG CCGAGGAGGC GGTTCAGGAC
GCGTTCGCCG AGGCCGTGCG GCGGTGGCCG CGGAGCGGGC TGCCGCCGAG TCCCGCCGGC
TGGATCGTCA CGACCGCCCG CAACCGCGCG ATCGACCGCC TGCGGCGCGA GGCCAGACGC
GCCGACCGGC ACGCCGAGGC GGCGCTCCTG CACGCCCGCG ACGAAGCGCC CGAGGACGAG
GAGGGACCCG TGCGCGACGA TCGCCTGCGC CTGATCTTCA CCTGCTGCCA TCCCGCGCTC
GGCAGCAGCG CCCAAGTCGC GCTGACGCTG CGGCTGCTCG GCGGGCTCAG CACCGCCGAG
ATCGCGCGCG CCTTCCTCGT GCCGGAGCCG ACGATGGCGC AACGGCTCGT GCGCGCCAAG
GGCAAGATCC GCGACGCGCG GATCCCCTAC CGCGTGCCGC GCGAGGCCGA CCTGCCCGAG
CGTCTGCGGG CGGTGCTCGC CGTCGTCTAC CTCGTCTTCA ACGAGGGCCA CACCGCGACC
GCCGGCGATC AGCTCGTGCG CGAGGACCTG TGCGCAGAGG CGATCCGCCT CGGGCGCCTG
CTGGCGGAGC TGATGCCGGA CGAGCCGGAG GTGCTGGGAC TGCTCGCGCT GATGCTGCTG
GTGACCTCTC GGCGGCCGGC GCGCACGGGT CCCGGCGGCG AGCTGGTGCT GCTCGCCGAG
CAGGCGCGCG AGCGCTGGGA CCGCGACCTG ATCGCCGAGG GACAGGCGCT CGTGCGGCGC
TGCCTGCGAC GCGACGAGCC CGGTCCGTAC CAGCTGCAGG CCGCGATCAA CGCCGTCCAC
AGCGACGCGC CGACCGCCGC CGCGACCGAC TGGGGGCAGA TCGTCGCGCT CTACGACCAG
CTGCTCGTGT GCGCGCCGAC GCCGGTCGTC ACGCTCAACC GGGCCGTCGC GGTCGCCGAG
ATCGACGGTC CGCAGGCGGC GCTCGCGCTC GTCGACGACC TCCCGCTCGA CCACTACCAC
GTCTTCCACG CGGTCCGCGC CGACCTGCTG CGGCGGCTCG GCCGCGACGC TGAGGCGGCG
ACCGCGTACG CCGCGGCGAT CGAGCGGACC GGCAACGCCG CCGAGCGCGC CTTCCTGGCA
CGCCGCCGCG CCGGCGTCGG TCCGTGA
|
|---|
| Protein sequence | MTPLPAGEVE RVFRAEHGRA VAVLARIFGD LDVAEEAVQD AFAEAVRRWP RSGLPPSPAG
WIVTTARNRA IDRLRREARR ADRHAEAALL HARDEAPEDE EGPVRDDRLR LIFTCCHPAL
GSSAQVALTL RLLGGLSTAE IARAFLVPEP TMAQRLVRAK GKIRDARIPY RVPREADLPE
RLRAVLAVVY LVFNEGHTAT AGDQLVREDL CAEAIRLGRL LAELMPDEPE VLGLLALMLL
VTSRRPARTG PGGELVLLAE QARERWDRDL IAEGQALVRR CLRRDEPGPY QLQAAINAVH
SDAPTAAATD WGQIVALYDQ LLVCAPTPVV TLNRAVAVAE IDGPQAALAL VDDLPLDHYH
VFHAVRADLL RRLGRDAEAA TAYAAAIERT GNAAERAFLA RRRAGVGP
|
|---|
| |