| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_1886 |
|---|
| Symbol | |
|---|
| ID | 8732327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | + |
|---|
| Start bp | 1985031 |
|---|
| End bp | 1986572 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 646502503 |
|---|
| Product | carbohydrate kinase, YjeF related protein |
|---|
| Protein accession | YP_003393687 |
|---|
| Protein GI | 284043347 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0063] Predicted sugar kinase |
|---|
| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0794004 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.131281 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCAG TGCTTCCGGC CTGGCTCGAT CCGCTGCCGG ACGCCGCCGC CCAGCGCGCG
CTCGACGGCT GGGCGATCGA GCAGCGCGGG ATCCCCGGGA TCGAGCTGAT GGAGCGCGCC
GGGCGCGGGC TGTTCGAGCT GGTCCAGCGC TGCGTCCCGG ACGGGACGAT CGCCGTCGTC
TGCGGTAAGG GCAACAACGG CGGCGACGGC CTCGTCGTCG CGCGCCTGCT GCGCGAGGCC
GGCCGCGAGG TCGACGTCCA CCTGCTGCCC GACCCGGGTG AGCTGGAGGG CGACGCGCGC
ACGAACCTGG AGCGGCTGTG CGGCGCCCCG CCGCGGATCT TCAACCCGGG CGCGCTGTTC
GAGGTCGCCG GCATCGTCGA CGCCGTCCTC GGCACCGGCG CGAGCGGCGC ACCGCGCGGC
CTTGTCGGCG ACGCGGTCGA CACGATCGCC GCCGCCGCAG ACCACGGTGT GACGGTCGTC
GCCTGCGACG TCCCCAGCGG CGTCGACGCC TCCACCGGCG AGGTCGCGGG CGTCGCGGTG
CGCGCACGGG CGACCGCGAC CTTCCACGCC GCCAAGCCAG GCCTCTGGAT CGCGCCCGGC
AAGCAGCACG CGGGCGAGGT CGTCGTCGTC GACATCGGGA TCCCCGGCGA CGACGGCGGA
CGCCCGCCGG CGACAGTCGC GGGTGCCGGC GCGATCACCG CCGCCGTCCT CGCCGAGCTG
CCCTCGCGCG GCGCGGCCTC GACGAAGTTC GACGGCGGCA GCGTGCTCGT CTGCGGCGGC
TCGACCGGCC TCACCGGTGC GCCCTCGCTC GCCTCGGCGG CGGCGGCGCG GGCCGGCGCC
GGCTACGTGA CGGTGCTCGT GCCGGCGTCG CTGAACCTCG TCTTCGAGGT GCGGCAGGCG
GAGGTGATGT CGGTCCCGCT GCCTGACGAG GACGGGGCGT TGATGCCCGC GGCGGTCGCA
CCGGCGCTGG AGCGACTGGA GCGAGCCGAC GCGCTCGTGC TCGGACCCGG CCTCGGGCGG
GCGGAGGGGT CGGCGCAGTT CGCGCGCGAC CTCGCGGCGG CCGCGAACGT GCCGCTGGTG
CTCGACGCGG ACGGTCTCAA CGCGCACGCC GGGCGGCTGG AGGATCTCGC CAGCCGCCGC
GCGCCCACGG TCCTGACGCC GCACGGCGGC GAGCTGGCGC GGCTGCTGGG CGTGGGGAAC
GAGGAGGTGC GCGGGCGGCG GCTGGCGCTT GCGCGCGAGG CCGCCCACCG CGCGGGCGCG
ATCGTCGTCC TGAAGGGCGA CGACACGCTC GTGGTGACAC CGGCCGGAGC GGTCGCGGTC
AGCCCCGGCG ACGCGCCGGC GCTCGCGACG GCGGGGACCG GGGACGTGCT CGGCGGGACG
ATCGCGGCGC TGCTGGCGCG CCGGGTCGAG CCGTTCGCCG CCGCCTGCGC CGGCGTCGAG
CTGCACCGCC GCGCGGGCCG GATCGTCGGC GAGCGGATCG GCGTCGAGGG CGCGATCGCC
GGTGACGTGA TCGACGCGCT GCCGGCCGCG CGACGCCGCT GA
|
|---|
| Protein sequence | MSAVLPAWLD PLPDAAAQRA LDGWAIEQRG IPGIELMERA GRGLFELVQR CVPDGTIAVV
CGKGNNGGDG LVVARLLREA GREVDVHLLP DPGELEGDAR TNLERLCGAP PRIFNPGALF
EVAGIVDAVL GTGASGAPRG LVGDAVDTIA AAADHGVTVV ACDVPSGVDA STGEVAGVAV
RARATATFHA AKPGLWIAPG KQHAGEVVVV DIGIPGDDGG RPPATVAGAG AITAAVLAEL
PSRGAASTKF DGGSVLVCGG STGLTGAPSL ASAAAARAGA GYVTVLVPAS LNLVFEVRQA
EVMSVPLPDE DGALMPAAVA PALERLERAD ALVLGPGLGR AEGSAQFARD LAAAANVPLV
LDADGLNAHA GRLEDLASRR APTVLTPHGG ELARLLGVGN EEVRGRRLAL AREAAHRAGA
IVVLKGDDTL VVTPAGAVAV SPGDAPALAT AGTGDVLGGT IAALLARRVE PFAAACAGVE
LHRRAGRIVG ERIGVEGAIA GDVIDALPAA RRR
|
|---|
| |