Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cwoe_1764 |
Symbol | |
ID | 8732205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Conexibacter woesei DSM 14684 |
Kingdom | Bacteria |
Replicon accession | NC_013739 |
Strand | + |
Start bp | 1860127 |
End bp | 1860951 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 646502382 |
Product | Rhomboid family protein |
Protein accession | YP_003393566 |
Protein GI | 284043226 |
COG category | [R] General function prediction only |
COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.949335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.141718 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACCT GTTACCGCCA CCCCACGCGC GAGACGGGCG TCGCCTGCTC CAACTGCGGC CGCCCGATCT GCCCCGACTG CATGACGCCG ACGCCGGTCG GCATGCGCTG CCCCGAGTGC TCGCGCGAGA AGACGAAGGT CCACCGCGGC CCGGTGCGTC GTCCGACGAC GGAGCCGACG GCGACGTACG TCCTGATCGC GATCAGCGTG CTCGCCTACG TCGGCGAGCT GGCCTCGGGC GGGCGGATCA ACGACGCCGG CGGGACGCTG TACGAGAACG GTGTCCTGTG GGGGCCGTAC ATCGCGCAGA GAGACGAGAT ATGGCGGATG GTCACATCCG GCTTCCTGCA CGCGAGCCTC TTCCACATCC TCTTCAACAT GTGGTTCATC TGGGTGCTCG GCAGGATGCT GGAGCCGGTG CTCGGGCACG TGCGCTTCGT GACGCTCTAC TTCACCGCGC TGCTGTGCGG CTCGTTCGCG GTGCTGCTGC TGGAGCCGAC CGCCCCGACG ATCGGCGCCT CCGGCGCGGC GTTCGGCCTG CTCGGAGCCG CGATCGTCGA GGCGCGTGCG CGCGGACTCG ACCTGTGGGC GTCCGGCCTC GCGCTCACGG CCGGCCTGAA CTTCCTGATC ACGTTCACGC TCCCCGGCAT CTCGATCGGC GGCCATGTCG GCGGCTTCCT CGGCGGCCTG CTCGTCGCGG TGATCTACCA GCAGGGCGAC CGCATGCGCC TCCCGCGCGC CGCGACCCTC GGGGCGTGCA TCGCGATCGC GGTCCTGGCA GTGCTCGGCG GCGTCGCCGT CGCGGGCAGC AGAGGCCTGA TGTAG
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Protein sequence | MATCYRHPTR ETGVACSNCG RPICPDCMTP TPVGMRCPEC SREKTKVHRG PVRRPTTEPT ATYVLIAISV LAYVGELASG GRINDAGGTL YENGVLWGPY IAQRDEIWRM VTSGFLHASL FHILFNMWFI WVLGRMLEPV LGHVRFVTLY FTALLCGSFA VLLLEPTAPT IGASGAAFGL LGAAIVEARA RGLDLWASGL ALTAGLNFLI TFTLPGISIG GHVGGFLGGL LVAVIYQQGD RMRLPRAATL GACIAIAVLA VLGGVAVAGS RGLM
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