Gene Cwoe_1764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_1764 
Symbol 
ID8732205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp1860127 
End bp1860951 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content71% 
IMG OID646502382 
ProductRhomboid family protein 
Protein accessionYP_003393566 
Protein GI284043226 
COG category[R] General function prediction only 
COG ID[COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.949335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.141718 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCT GTTACCGCCA CCCCACGCGC GAGACGGGCG TCGCCTGCTC CAACTGCGGC 
CGCCCGATCT GCCCCGACTG CATGACGCCG ACGCCGGTCG GCATGCGCTG CCCCGAGTGC
TCGCGCGAGA AGACGAAGGT CCACCGCGGC CCGGTGCGTC GTCCGACGAC GGAGCCGACG
GCGACGTACG TCCTGATCGC GATCAGCGTG CTCGCCTACG TCGGCGAGCT GGCCTCGGGC
GGGCGGATCA ACGACGCCGG CGGGACGCTG TACGAGAACG GTGTCCTGTG GGGGCCGTAC
ATCGCGCAGA GAGACGAGAT ATGGCGGATG GTCACATCCG GCTTCCTGCA CGCGAGCCTC
TTCCACATCC TCTTCAACAT GTGGTTCATC TGGGTGCTCG GCAGGATGCT GGAGCCGGTG
CTCGGGCACG TGCGCTTCGT GACGCTCTAC TTCACCGCGC TGCTGTGCGG CTCGTTCGCG
GTGCTGCTGC TGGAGCCGAC CGCCCCGACG ATCGGCGCCT CCGGCGCGGC GTTCGGCCTG
CTCGGAGCCG CGATCGTCGA GGCGCGTGCG CGCGGACTCG ACCTGTGGGC GTCCGGCCTC
GCGCTCACGG CCGGCCTGAA CTTCCTGATC ACGTTCACGC TCCCCGGCAT CTCGATCGGC
GGCCATGTCG GCGGCTTCCT CGGCGGCCTG CTCGTCGCGG TGATCTACCA GCAGGGCGAC
CGCATGCGCC TCCCGCGCGC CGCGACCCTC GGGGCGTGCA TCGCGATCGC GGTCCTGGCA
GTGCTCGGCG GCGTCGCCGT CGCGGGCAGC AGAGGCCTGA TGTAG
 
Protein sequence
MATCYRHPTR ETGVACSNCG RPICPDCMTP TPVGMRCPEC SREKTKVHRG PVRRPTTEPT 
ATYVLIAISV LAYVGELASG GRINDAGGTL YENGVLWGPY IAQRDEIWRM VTSGFLHASL
FHILFNMWFI WVLGRMLEPV LGHVRFVTLY FTALLCGSFA VLLLEPTAPT IGASGAAFGL
LGAAIVEARA RGLDLWASGL ALTAGLNFLI TFTLPGISIG GHVGGFLGGL LVAVIYQQGD
RMRLPRAATL GACIAIAVLA VLGGVAVAGS RGLM