| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_0336 |
|---|
| Symbol | |
|---|
| ID | 8730764 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | - |
|---|
| Start bp | 343321 |
|---|
| End bp | 344874 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 646500950 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003392147 |
|---|
| Protein GI | 284041807 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.145673 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTCCA CCGGACCCCC TCGCGCCGGA CGCCGCGAAT GGCTCGCGCT CGCCGTCCTC
GCCCTCCCGA CGCTGCTCGT CTCGATGGAC CTGACCGTCC TCCACCTCGC GCTGCCATCG
CTCAGCCGCG ACCTCGACCC GAGCAGCACC CAGCTGCTGT GGATCGTCGA CGTCTACGGC
TTCCTGATCG CCGGCGCGCT GATCACGATG GGGACGCTCG GCGACCGTGT CGGCCGCCGG
CGCCTGCTGC TGATCGGCGC CGCCGCGTTC GGTGCCGCCT CCGTGCTGGC GGCCTTCGCG
ACCAGCGCCG AGCTGCTGAT CGCGGCGCGC GCGCTGCTCG GCGTCGCCGG CGCGACGCTG
ATGCCGTCGA CCCTCTCGCT GATCCGCAAC CTCTTCCACG ACCCCGCCCA GCGGACGACC
GCGATCGCGG TGTGGATGAC CAGCTTCATG GCCGGCGCCG CGATCGGCCC GATCGTCGGC
GGCCTGCTGC TGGAGCAGTT CTGGTGGGGC TCGGTCTTCC TGCTCGGCGT CCCCGTGATG
GCGCTGCTGC TGGTGCTCGG CCCGCTGCTG CTGCCGGAGA GCCGCGACCC CGCCGCCGGC
CGGCTCGACC TGCTGAGCGC CGCCCTCTCG CTCGTCGCGG TGCTGTCCGC CGTGTGGGGC
GTCAAGCGGA TCGCCGAGCA CGGCGCCGAC GGCGCGGCGA TCGCGTCGCT CGCCGCCGGC
CTCGCGCTCG GCACGGTCTT CGTGCTGCGC CAGCGGGGGC TCGCGGACCC GCTGATCGAC
CTGCGGCTGT TCCGTGCGCG CACGTTCAGC GGCGGGCTCG GCACGCAGAC GCTGACGATC
TTCGCGTTCG GCGGGACGCA GCTGTTCGTC GGCCAGTACC TCCAGCTCGT GCACGGGCTC
TCGCCGCTGG AGGCGGGCCT GTGGCTGCTC CCGGGGATGC TCGCCGGCAT CGCCGGCGCG
ATGCTCGCGC CCGTCGCCGT GCGGCACGTG CGGCCGGCCC GCGTGATCGG CACCGGCCTG
CTGCTGGCCG CCGGCGGGCT GCTGGCGATC GCGTTCGTGA GCACCGGGTC CGGGCTCGCG
CTGATCGTCG CCGGCCAGAT GGTCGCCTCG TTCGGCGTCG GACCCGCGAT GACGCTGACG
ACCGACATGA TCGTCGGCTC CGCGCCGCCC GAGCGGGCGG GATCGGCGTC GGCGATCTCG
GAGACCGGCG GCGAGCTGGG GCAGGCGCTC GGGATCGCGC TCGTCGGCAG CGTCGGCACC
GCCGTCTACC GCGGCGGGAT CGACGAGCGG ATGCCCGCGG GCGTCCCGGC GGCGGAGACG
AAGGCCGCGC GCGACACGCT CGGCGGCGCC GCCGAGGCGT CGGACGAGCT GCCCGCCCCG
CTCGGCGGCG AGCTGCTCGA CGCCGCCCGC GAGGCGTTCA CGCAGGGGCT GCAGGCGACC
GCGACGGTGA GCGCCGTGGT CCTCTCGGGC GTCGCCGCGA TGGCGCTCGT GCTGCTGCGG
CGCGCGCCGT CGGCCGGTGC GCCGGAGCCG GAGCCGGTCG GCGCCGAGGC GTGA
|
|---|
| Protein sequence | MPSTGPPRAG RREWLALAVL ALPTLLVSMD LTVLHLALPS LSRDLDPSST QLLWIVDVYG
FLIAGALITM GTLGDRVGRR RLLLIGAAAF GAASVLAAFA TSAELLIAAR ALLGVAGATL
MPSTLSLIRN LFHDPAQRTT AIAVWMTSFM AGAAIGPIVG GLLLEQFWWG SVFLLGVPVM
ALLLVLGPLL LPESRDPAAG RLDLLSAALS LVAVLSAVWG VKRIAEHGAD GAAIASLAAG
LALGTVFVLR QRGLADPLID LRLFRARTFS GGLGTQTLTI FAFGGTQLFV GQYLQLVHGL
SPLEAGLWLL PGMLAGIAGA MLAPVAVRHV RPARVIGTGL LLAAGGLLAI AFVSTGSGLA
LIVAGQMVAS FGVGPAMTLT TDMIVGSAPP ERAGSASAIS ETGGELGQAL GIALVGSVGT
AVYRGGIDER MPAGVPAAET KAARDTLGGA AEASDELPAP LGGELLDAAR EAFTQGLQAT
ATVSAVVLSG VAAMALVLLR RAPSAGAPEP EPVGAEA
|
|---|
| |