| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_0115 |
|---|
| Symbol | |
|---|
| ID | 8730543 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | + |
|---|
| Start bp | 112125 |
|---|
| End bp | 113132 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 646500729 |
|---|
| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_003391926 |
|---|
| Protein GI | 284041586 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0501271 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0843841 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGA CCACCGACAC GGTCACCGAC GCGGTGCTCG ACGTGCGCGA CCTGCGCGTC
GCGTTCGGCC CGATCGAGCC GGTCCGCGGC GTCTCCTTCT CGCTGCGCAG AGGCGAGCGG
CTCGGCCTCG TCGGCGAGTC CGGCTCCGGC AAGTCGCTGA CCGCGCTCGC GATCATGCGG
CTCGCCCGCC GCGCGCAGCT GTCCGGCCAG GTGCTGCTGG AGGGCGAGGA CCTGCTGACG
CTCAAGCCGC GTCAGATGGA GAAGGTCCGC GGCGGGCGCG TGGCGATGGT CTACCAGGAC
CCGATGTCGG CGCTCAACCC CGTGCAGACG GTCGGCCACC AGCTGGAGGA GGCGATCCGC
CTCCACAGCC GGCTCGACCG CAGAGGCGCG CGCGAGCGCG CGATCGAGCT GCTCGACGGC
GTCGGCGTGC CGCACCCGCA GCGCCGCGTG GAGCAGTACC CGCACGAGTT CTCCGGCGGC
ATGCGCCAGC GCGTGATGAT CGCGATGGCG ATGTGCGCCG ACCCGGCCGT GCTGATCTGC
GACGAGCCGA CGACCGCGCT CGACGTCACG ACGCAGGCGC GGATCATGGA CCTGCTCGAC
CGTCTCGTCG AGGACCACGG CACCGCGGTC ATGCTGATCA CGCACGACCT CGGCGTCGCG
GCCGGCTTCT GCGATTCGAT CCAGGTGATG TACGGCGGGC GGATCGTCGA GCGCGCGGAG
GCCGAGGCCC TGTACCGCGC GCCGGTCCAC CCGTACAGCG AGGCGCTGCT CGGCGCCGCC
GTCGACCTGT CGCTGGAGCT GGGCGTGCCG ATCCCGACGA TCGGCGGACA GCCGCCGCTC
GCCGGCCGGC TGCCGAGCGG CTGCAGCTTC CACCCGCGTT GTCCGCACGC GCAGGACGTC
TGCCGCACCG ACAGCCCGGC GCTGGAGTCT GCCGCCGGCC GTCCCGTCGC CTGTCACTTC
GCCGACGCGC GCGCCCAGAC CCTCGAGGAG TCCGATGTCC GTGTCTGA
|
|---|
| Protein sequence | MSETTDTVTD AVLDVRDLRV AFGPIEPVRG VSFSLRRGER LGLVGESGSG KSLTALAIMR
LARRAQLSGQ VLLEGEDLLT LKPRQMEKVR GGRVAMVYQD PMSALNPVQT VGHQLEEAIR
LHSRLDRRGA RERAIELLDG VGVPHPQRRV EQYPHEFSGG MRQRVMIAMA MCADPAVLIC
DEPTTALDVT TQARIMDLLD RLVEDHGTAV MLITHDLGVA AGFCDSIQVM YGGRIVERAE
AEALYRAPVH PYSEALLGAA VDLSLELGVP IPTIGGQPPL AGRLPSGCSF HPRCPHAQDV
CRTDSPALES AAGRPVACHF ADARAQTLEE SDVRV
|
|---|
| |