Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_3188 |
Symbol | |
ID | 4809490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 3768943 |
End bp | 3770430 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640108622 |
Product | copper amine oxidase-like protein |
Protein accession | YP_001039576 |
Protein GI | 125975666 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000368192 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTATTAG CTGTAAATTT TGGCACTGTG ACTACTTTTG CGGCAATGAG TGATGAAGCC GAGTCAATAT CGGTAAACAA ACCGGTTACC GACAATTTGT CTTCGGTTAA TGATGTAAAG TATTACGAGG TGGAGCTGCC GGCACCGGGA AAAGTGAACT TAAGCTTTAG TCATGCTAAT TTGGAAAGAA CATATGTATA CTGGAAAGTT ACCATGTTTG ACAGTGTGGA GAATGAAGTG TTGTATTTTG AATCAACAGG AACCAACACC GATGGTAAAT CAATGAGTGT ATATCTCGAT AAAGGTACAT ATTATGTCAG GGTTAAAAGT GAAGGTTATT GGTATAGCAC TACTGATTAT ACGCTTTGTG TAAACTATAC GGAAAACAAG GGAGAATATG AAATTGAACC AAACTATAGC AAGGAATTGG CAACAGAGAT TTCAGTAAAT AAGCCTGTTA TCGGTAATCA CAGAGTGAAA GGTGATACAG ACTTTTATAA GTTTACAATA TCAGAACCGG GAAAAGTAGA CTTAAGCTTT AACCATGCCA ACTTGGAAAG AACATATGTA TACTGGAAAG TTACCATGTT TGACAGTGTG GAAAACATAG TATTGTATTT TGAATCAACA GGAACCAATA CAACCGGTAA ATCCATGAAT GCCTACCTCA GTGAGGGTAC ATATTATATT CGAGTTACAA CTGATGATTA CTGGCATAGT ACTGCCGATT ACACTCTTTG TGTAAACTAC ACGGAAAATC AGGGTGAATA TGAAATTGAG CCAAACAACA GCCAAGACAA TGCGACGTTG ATAGAGGTGG ACGAACCGGT TACAGGAAAT CTGAGAACCA GTTCAGATGT TGACTATTAT AGATTTGTAA TGCCTGATTC CGGAAAAGTA TATTTGGGAT TTAACCATCC AAACCTTGAA AGAACATATG TGTATTGGAA AGTTTCCCTG TATGATGCAA ATGGCAACAG GCTTTATCAA CTAAATTCCA GAGGTACTGA TACAGTTGGA AAGTCGGATG AAATAAAAAT TGGAAGTGGC ACGTATTATG TCAAGGTTGA ATACGAAGGA TACTGGCACA GCAGTGCCGA CTACAGCCTT ACGGTAAATA CGGTGGGCGG TATCCCAAAA GTTAAAGTTT TCCTAAACGG CAAGAGAATC AGGTTTGACC AGCCGCCTAT TATACAAAAC GGCCGCACAC TTGTGCCTTT ACGTGCAATA TTTGAAGCCA TGAACGCCAC TGTTTCATGG GATGACAAGA CAAAGACGGT TACGGCAAAG AAAGGCGATA CAACTATCGT CATGACAATT GGCAACAAAA CGATGAAGAA AAACGGAGTA GCAATCGAAC TGGATGTTCC GCCGCAAATC GTTAACGGCA GAACCTTGGT TCCGGCCCGT GCAGTTGCGG AAAGCTTTGG TGCAAAAGTG GACTGGGACG GCAGTACCAG GACGGTTACA ATTACGGAAG GAAATTAA
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Protein sequence | MVLAVNFGTV TTFAAMSDEA ESISVNKPVT DNLSSVNDVK YYEVELPAPG KVNLSFSHAN LERTYVYWKV TMFDSVENEV LYFESTGTNT DGKSMSVYLD KGTYYVRVKS EGYWYSTTDY TLCVNYTENK GEYEIEPNYS KELATEISVN KPVIGNHRVK GDTDFYKFTI SEPGKVDLSF NHANLERTYV YWKVTMFDSV ENIVLYFEST GTNTTGKSMN AYLSEGTYYI RVTTDDYWHS TADYTLCVNY TENQGEYEIE PNNSQDNATL IEVDEPVTGN LRTSSDVDYY RFVMPDSGKV YLGFNHPNLE RTYVYWKVSL YDANGNRLYQ LNSRGTDTVG KSDEIKIGSG TYYVKVEYEG YWHSSADYSL TVNTVGGIPK VKVFLNGKRI RFDQPPIIQN GRTLVPLRAI FEAMNATVSW DDKTKTVTAK KGDTTIVMTI GNKTMKKNGV AIELDVPPQI VNGRTLVPAR AVAESFGAKV DWDGSTRTVT ITEGN
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