| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_3178 |
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| Symbol | |
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| ID | 4809629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 3755283 |
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| End bp | 3756872 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640108612 |
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| Product | hypothetical protein |
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| Protein accession | YP_001039566 |
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| Protein GI | 125975656 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1315] Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACATC AAACACTGTA CCAGGATGAC TTTGTAGAAA TTTTCGAACA AGACAACGAA
GTTTTCATCA AAACATTCAA ACCCGGTCTT CCGCCAAAAC AATTAAATGA AATATTGTCG
TCACTTCCCC AGATACAAAT AACGAGCTTC AACTGCCTTA ACGACGCCCT AAACATCGTT
TCCCCGTCCC CCCAAAAATT CGGCCGGTTA AAGGAAAGAA TCGCCATAAC TGTTACCCCG
GACGAATTAA AAGCTTTCGT CACTTTCAAC TTACCCAGGG AAGAACTGGA TATTAAAAAC
CGCGAAAATC TAATAAAAGA AACCTATCAA GTTTTGAAGA AAAAAAACAT AAACTTTGGA
ATAAAAAAAG AATTGTTCTT CGGTGATTTG GAAAGCGGAA AAAAATATCT CATAGCTGAA
GGAGTACCTG CCGTTGACGG GGAAGACTGC AAAATCAGGA TGTACGAACT TGAAGAGCCC
AGACCTGAAA TAAGAGAGGA CGGAAAAGCA AACTACTATG AATTGAAGCT GATTAACAAG
GTCAAGGCCG GAGACTGGCT CGGTGAGCGC ATTGACGCAA CCGAAGGTTT CCCGGGGAAA
ACCGTATATG GCACCACTAT TCATCCTGTA AGAGGAAAAA ATTATCCTCT TTCCTATGAT
AAAAATACCG TTTACGAAGT GGTACAAAAC AAGAAAGTTG TCCTATATTC AAAAATAGAC
GGTGCCGTAC ACTATGACGG CAATAAAATC ACCGTGTCGA ACCATCTTGA AATTGACGGT
GACGTGGACT TTAAAACTGG CAACATAATT TTTGACGGAT ATGTAACCAT TAAAGGTACC
GTCACCGACG GATTCTACGT TGAAGCCACA AAAGACATAG AAATAAACAG CCCGTTGGGA
CTTGGAAACG TCAAGGGAAT AAAAAGCCGT GAAGGAAGCA TCTACATAAA AGGCGGAATA
TCGTCAAAAA GTTTCTCGGA AATTTCTGCC AGGAAAAACA TTTACACAAA GTTTGTGGAC
AATGTCAAAT TATCCTGCGG CGGCACCGCC CACATAGGTT TTTATTGCAT AAACAGCATG
GTTGAAGCAA AAGAAGTGTT TATTGAATCA ATAAAAGGAA ACATAATGGG AGGTCAGGTA
AAAGCGGAAG TAAAAATTAC CGTACCTGTT TTAGGTTCGC CGCTGGAACC AAGAACCGTA
CTCATTCTTA CAGGCTTTGA CAGAAAAAAA CTTTCAAAAA TGCTGGAAGA CATAGTTGAC
AGAATAGACA GAATAAAAGA GGAACAAATG GACATAAAGC TGTATTTGTC AAAACAAGAC
CCCTTTAAAG AAATGACTTC CCGGGAGACA GCGGAATACA ATTCAAAAAT GCAGAGGATG
TCCGAACTTA AAGCAGAGCT TAAATCCTTG GAAGAAGAAA AAAAGAATAT TGCAAGATAT
TTAAAAACAA AAGGCGAAGG TGAAATAGCC ATAACAAAAA AGGTTTATCC CAACTGTTCA
ATAATTATAA AAAATATACA AACCGAAATA AAGGAGCCTT GCCTTGCAAC AACCTTTTTT
GCAGCCGACG GCGAAATTAA ACGTGTTTAG
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| Protein sequence | MQHQTLYQDD FVEIFEQDNE VFIKTFKPGL PPKQLNEILS SLPQIQITSF NCLNDALNIV
SPSPQKFGRL KERIAITVTP DELKAFVTFN LPREELDIKN RENLIKETYQ VLKKKNINFG
IKKELFFGDL ESGKKYLIAE GVPAVDGEDC KIRMYELEEP RPEIREDGKA NYYELKLINK
VKAGDWLGER IDATEGFPGK TVYGTTIHPV RGKNYPLSYD KNTVYEVVQN KKVVLYSKID
GAVHYDGNKI TVSNHLEIDG DVDFKTGNII FDGYVTIKGT VTDGFYVEAT KDIEINSPLG
LGNVKGIKSR EGSIYIKGGI SSKSFSEISA RKNIYTKFVD NVKLSCGGTA HIGFYCINSM
VEAKEVFIES IKGNIMGGQV KAEVKITVPV LGSPLEPRTV LILTGFDRKK LSKMLEDIVD
RIDRIKEEQM DIKLYLSKQD PFKEMTSRET AEYNSKMQRM SELKAELKSL EEEKKNIARY
LKTKGEGEIA ITKKVYPNCS IIIKNIQTEI KEPCLATTFF AADGEIKRV
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