| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_3120 |
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| Symbol | |
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| ID | 4809683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 3680605 |
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| End bp | 3684141 |
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| Gene Length | 3537 bp |
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| Protein Length | 1178 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640108553 |
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| Product | pyruvate flavodoxin/ferredoxin oxidoreductase-like protein |
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| Protein accession | YP_001039508 |
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| Protein GI | 125975598 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
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| TIGRFAM ID | [TIGR02175] 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family
[TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGAAAG TGCAGAAATT TGAAACAATG GATGGAAATC AGGCGGCTGC GTATGCATCT
TACGCTTTTA CGGATGTTGC AACAATATAT CCGATAACGC CGTCATCGCC CATGGCGGAA
ACTGTGGATG AATGGGCAGC CCATGGAAAG AAAAACATTT TCGGACAGCC GGTCAGAGTT
GTGCAGATGC AGTCCGAGGC AGGTGCCGCC GGTGCAATGC ACGGTTCTCT TGCGGCAGGG
GCATTGACGA CCACTTATAC TGCTTCCCAG GGGCTTTTGC TGATGATCCC GAACCTGTAC
AAAATGGCGG GAGAGCTTTT GCCCGGAGTA TTGCATGTTT CGGCGAGAGC AATTGCAACC
CATGCTTTGT CCATATTTGG CGACCACCAG GATGTAATGG CTTGTCGTCA GACCGGAGTT
GCACTCCTTG CATCATCCAA TGTTCAGGAA GCGGCAGACT TGGGATATGT TGCGCATCTT
TCGGCCATTA AATCCCGGGT TCCGTTTATC CATTTCTTTG ACGGTTTCAG AACTTCCCAT
GAATATCAGA AGATTGGACT GATTGAATAC GATGAACTTG CAAAGCTTGT CGACCATAAT
GCAATAAAAG AATTCAGGGA CAGGGCTTTA AATCCTGAAC ATCCTGTTGC CAGAGGAACG
GCGCAAAATC CGGATATTTA TTTCCAGGGA AGAGAAGTAC AGAATAAATT CTATGACAAC
GTTCCCGATA TTGTTGCAGG CTATATGCAG GAAATAAAAA GGATTACAGG CCGCGAATAC
CGCCCGTTTG ATTATTACGG GGCAAAAGAT GCGGAATATG TGATTGTGGC AATGGGTTCC
GTTTGCGATA CCATTGATGA AACCATTGAC TACCTTATGG CGAAGGGAGA AAAGGTAGGT
TCTGTAAGAG TACACCTTTA CAGGCCTTTC TCCGAAAAGT ACTTCTTTGA CGTAATTCCA
AAAACGGTGA AGAAAATTGC AGTGCTTGAC AGGACTAAAG AACCCGGAGC ACCGGGAGAG
CCTTTGTACC TTGATGTTTC AAAAATGTAT CTGTCAAAAG AAAACAGGCC GGTTATCGTA
GGCGGAAGAT ATGGACTCGG TTCGAAGGAT ACCAGACCGT CCCAAATCAT ATCAGTATTT
GAGAATTTGA AGCAGGATGA GCCGAAAAAC AACTTTACAA TTGGAATTGT CGATGATGTG
ACCAATTTGT CTCTTCCGGA AGGGGACATA ATTGAGACCA CACCTCAGGG GACAATAAGC
TGCAAATTCT GGGGCTTGGG TTCCGACGGT ACGGTTGGAG CAAACAAGTC TGCGATAAAG
ATAATAGGAG ACAATACAGA CCTGTATGTA CAAGGTTATT TCTCCTATGA CAGTAAAAAG
TCAGGTGGAA CTACCATTTC CCACTTAAGA TTCGGTCCGA AGCCTCTGCG TTCCCCATAT
CTTGTGTATA ACGCTGATTA TATCGCCTGC CACAACAAGT CCTTCATATA CAATTATGAT
ATTTTAAAAG GGCTTAAAAA GGGAGGTACT TTCGTACTTA ACTGTCCGTG GAGCGAAGAG
GAGCTGGACA AACATCTTCC CGCGTCAATG AAGAGATATA TTGCAAACAA CGACATCAAG
TTTTATATAA TAGATGCTTT AAAAATTGCT TCCGACATTG GACTTGGCAA CAGAATCAAC
ATGGTTATGC AATCGGCGTT TTTCAAACTG GCAAATATAA TCCCTATTGA GGATGCCGTA
AAATATCTTA AAGATTCAAT TGAAAAAACT TACGGCAAAA AAGGCCACAA GATAGTTGAG
ATGAACAATG CCGCTGTTGA CAAGGGACAG GAAGCATTAA TAAAGGTGAA TGTGCCTGAG
TCATGGAAAA ATGCTGTTGA TGAGGAAGTG CCGGTTAAGA AGGAAGAACC GGAGTTTGTG
AAAAAGATTC AAAGAGTAAT GGCCAGAAAT GAAGGCGATG AACTGCCTGT AAGCGCATTT
TTGGGAATGG AGGACGGCAC ACATCCGTTG GGTACCACGG CTTATGAAAA GCGTGGAATT
GCTCCAATGA TCCCCGAATG GCAGATTGAC AAATGTATCC AGTGCGGACA GTGCTCCTTT
GTATGTCCTC ACAGTACAAT CCGGTTGTTC CTGCTCAATG ATGAAGAGCT AAGCCGGGCA
CCGGAAACCT TTACAACCAA AAAAGCTATC GGAAAAGGAT TTGAAAACTT GCATTTCCGC
GTACAAGTTT CTCCCCTTGA CTGTACCGGA TGTGGTAATT GTGCCGATGT TTGTCCTACA
AAGGAAAAGG CATTGATCAT GAAGCCTGCG GAAGAGCAAA TAGAAAAACA GGCCGACAAC
TGGGAGTTTG CGATGACTGT CACCCAGAAG GACAATTTGT TGGACCGCAA TACTTTGAAA
GGAAGCCAGC TTGTAAGGCC GCTTTTGGAG TTTAACGGAG CTTGTCCGGG ATGCGGTGAG
ACACCGTATG TAAGACTTCT TACCCAGCTT TTCGGCGAGA GAATGATGAT TGCCAACGCA
ACCGGATGTT CATCCATATG GGGAGCAAGT TCTCCATCCA TAGCTTATAC CACCAATGCG
GAGGGCAAAG GACCGGCATG GGCAAATTCT CTGTTTGAGG ATAATGCGGA GTTCGGCTTT
GGAATGTATT TGGCGGTCAA GCAGATAAGG GAGAGACTTG CCGACCTTAT GCAAATGGCT
GTAAATTCGG ATATTGATGA AAAGGTTAAA AATGCCTTCA GAGAATGGCT GGACAACAAA
GATGAGGCTG AAGGTTCAAA GACAGCTACA AAGCATATAT TTGAGGCGTT GAAAGACTAT
GATTACAAAG GAAACCGCAT AATTGAGGAG ATAATGGAAA AGAAGGATTA TCTCATCAAG
AAGTCCATCT GGATGATAGG TGGAGACGGA TGGGCTTATG ACATCGGCTA TGGAGGACTG
GATCAGGTTC TTTCCTCCGG CGAGGATGTG AATATACTTG TATTGGATAC GGAAGTTTAC
TCCAATACCG GCGGTCAGTC TTCAAAAGCA ACTCCGACAG CGGCTGTTGC AAAGTTTGCG
GCTGCAGGTA AGAGGGTAAG GAAAAAAGAT CTGGGACTTA TGGCTATGAG TTATGGTTAT
GTGTATGTGG CTCAGATAGC CATGGGCGCA AATATGAATC AGACCATAAA AGCCATGGTG
GAGGCGGAAA GCTACAAAGG ACCGTCACTT ATAATTGCGT ATTCGCCATG TATAAGCCAT
GGTATCAAAA CGGGTATGGG CACGAGCATA TTTGAAGAAA AGCGCGCTGT TGAAGCTGGT
TACTGGCATT TGTACAGATA CAACCCGATG CTTAAAGAGC AAGGCAAGAA TCCGTTTATT
CTGGAGTCGA AAGAACCGAC CACTCCTTAC AAGGAGTTCC TCAAGGGAGA AATCAGATAT
TCACAGCTTG CGAATGTATT CCCGGATGTG GCGGGAGAAA TGTTTGACGC TGCGGAAAGG
GATGCAAGAG AACGTTATGA GACTTACAAG AGACTGGCAG AACAGAAATA TTCGTAA
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| Protein sequence | MKKVQKFETM DGNQAAAYAS YAFTDVATIY PITPSSPMAE TVDEWAAHGK KNIFGQPVRV
VQMQSEAGAA GAMHGSLAAG ALTTTYTASQ GLLLMIPNLY KMAGELLPGV LHVSARAIAT
HALSIFGDHQ DVMACRQTGV ALLASSNVQE AADLGYVAHL SAIKSRVPFI HFFDGFRTSH
EYQKIGLIEY DELAKLVDHN AIKEFRDRAL NPEHPVARGT AQNPDIYFQG REVQNKFYDN
VPDIVAGYMQ EIKRITGREY RPFDYYGAKD AEYVIVAMGS VCDTIDETID YLMAKGEKVG
SVRVHLYRPF SEKYFFDVIP KTVKKIAVLD RTKEPGAPGE PLYLDVSKMY LSKENRPVIV
GGRYGLGSKD TRPSQIISVF ENLKQDEPKN NFTIGIVDDV TNLSLPEGDI IETTPQGTIS
CKFWGLGSDG TVGANKSAIK IIGDNTDLYV QGYFSYDSKK SGGTTISHLR FGPKPLRSPY
LVYNADYIAC HNKSFIYNYD ILKGLKKGGT FVLNCPWSEE ELDKHLPASM KRYIANNDIK
FYIIDALKIA SDIGLGNRIN MVMQSAFFKL ANIIPIEDAV KYLKDSIEKT YGKKGHKIVE
MNNAAVDKGQ EALIKVNVPE SWKNAVDEEV PVKKEEPEFV KKIQRVMARN EGDELPVSAF
LGMEDGTHPL GTTAYEKRGI APMIPEWQID KCIQCGQCSF VCPHSTIRLF LLNDEELSRA
PETFTTKKAI GKGFENLHFR VQVSPLDCTG CGNCADVCPT KEKALIMKPA EEQIEKQADN
WEFAMTVTQK DNLLDRNTLK GSQLVRPLLE FNGACPGCGE TPYVRLLTQL FGERMMIANA
TGCSSIWGAS SPSIAYTTNA EGKGPAWANS LFEDNAEFGF GMYLAVKQIR ERLADLMQMA
VNSDIDEKVK NAFREWLDNK DEAEGSKTAT KHIFEALKDY DYKGNRIIEE IMEKKDYLIK
KSIWMIGGDG WAYDIGYGGL DQVLSSGEDV NILVLDTEVY SNTGGQSSKA TPTAAVAKFA
AAGKRVRKKD LGLMAMSYGY VYVAQIAMGA NMNQTIKAMV EAESYKGPSL IIAYSPCISH
GIKTGMGTSI FEEKRAVEAG YWHLYRYNPM LKEQGKNPFI LESKEPTTPY KEFLKGEIRY
SQLANVFPDV AGEMFDAAER DARERYETYK RLAEQKYS
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