| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_3103 |
|---|
| Symbol | |
|---|
| ID | 4809729 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 3659904 |
|---|
| End bp | 3660890 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640108531 |
|---|
| Product | 2-hydroxyglutaryl-CoA dehydratase, D-component |
|---|
| Protein accession | YP_001039491 |
|---|
| Protein GI | 125975581 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1775] Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAAATA TAGGTTTTAC AACAAGCGTA CCCGTTGAGG TGATATTTGC GGCAGGGTAC
AGACCTGTTG ATTTAAATAA TGTTTTTATT ACCGATGATA ATCCGGGAAA GTTGATAGAA
GTGGCTGAAA ATACAGGTTT TCCCAGAAAT ATCTGTGCAT GGATAAAAGG TATTTATTCT
GCTGTGGCAG ATATGGGAGG AATAGATGAG CTGATAGGTG TTGTTGAAGG TGACTGCTCT
AATGCGAAAG CCCTTGTGGA GGTTTTGGAA CTGAAGGGCG TGCAATGTTT CCAGTTTTCA
TATCCCAGTT CCCGAAGTTA CGACCGGTTG AAAAAGGAAA TTGACAGGTT TTGCAGTCAT
TTTGGGGTCA GTTATGAAGA GTGTTTGAAA GTTAAAAAGG AATTGGACAA GATTAGACTA
AGACTTGCTT ATTTGGATGA ATTGACATGG AAGCACAACA AGGCCGGAGG ATTTGAAAAT
CACATATGGC AGGTTTCAAG CAGTGATTTT AACGGGGATT ATGTTACCTT TGGCCGCGAG
CTGGAAGATG CTATTTCCTC CATTGAAAAA AGGGAGCCGA AAACAGAGAG TAAAAGAATA
GGGTATATAG GAGTTCCGCC TATTAACGCA GATATATATG AATTTATTGA ATCTCTTGAT
GCCAGGGTGG TATATAATGA GGTGCAGAGA CAGTTTACAA TGGCAGATTC GGTTGGCATT
GAAGATATTG TGGAAGAATA CAGGAGATTT ACCTACCCGT ACGGTATAAG AGGCAGACTT
GAAGATATAA CGGTCCAGGT GAAAAAAAGA AAGATTGATG GGGTTATACA CTACACTCAG
GCATTTTGCT TTAGAGGTAT TGAAGACATT ATAATAAGGA AGGAACTTGG TGTCCCGGTT
CTTACCCTTG AAGGAGACAG ACCCGGAAAA CTTGACCAGA GAACAAGGCT TCGTATTGAA
GCGTTTATTG ATATGCTGGA TGAGTGA
|
|---|
| Protein sequence | MKNIGFTTSV PVEVIFAAGY RPVDLNNVFI TDDNPGKLIE VAENTGFPRN ICAWIKGIYS
AVADMGGIDE LIGVVEGDCS NAKALVEVLE LKGVQCFQFS YPSSRSYDRL KKEIDRFCSH
FGVSYEECLK VKKELDKIRL RLAYLDELTW KHNKAGGFEN HIWQVSSSDF NGDYVTFGRE
LEDAISSIEK REPKTESKRI GYIGVPPINA DIYEFIESLD ARVVYNEVQR QFTMADSVGI
EDIVEEYRRF TYPYGIRGRL EDITVQVKKR KIDGVIHYTQ AFCFRGIEDI IIRKELGVPV
LTLEGDRPGK LDQRTRLRIE AFIDMLDE
|
|---|
| |