Gene Cthe_3066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_3066 
Symbol 
ID4809940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3607660 
End bp3608385 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content39% 
IMG OID640108490 
ProductABC transporter related protein 
Protein accessionYP_001039455 
Protein GI125975545 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACTG TACTTGAAAT AAAGGGACTT ACCAAATTAT ATAAGAATGG AAGAGGAATT 
TTTGATATAA ATCTTGAAGT ATACAGAGGG GATGTGTTTG GATTCCTCGG CCCCAACGGT
GCGGGAAAGA CTACCGCTAT GAAAATTATG ACGGGTCTTA TGCATCCGAA CAGCGGAGAC
GTAAAAATTT TCGGGCACAG CGTTATAACC GAATTTGAAC AGGCCATGAA GAAAGTGGGC
TGTATAATTG AAACTGCGGA ATCCTATGCA TATCTTACAC CTTATGAGAA TTTAAAACTT
TTTGCTAGAT TCTATGATGA CGTGGATGAT AAAAGAATTG ATGAAGTCCT GGAGCTCACC
GGCATTCTTA AGTTCAAAAA AGAAAAAGTG AAGAATTTTT CTCTTGGTAT GAAGCAAAGG
CTCGGGTTGG CTGCGGCAAT TTTGTCAAGG CCCGAATTGG TGATATTGGA CGAGCCGTTA
AATGGACTTG ACGTGGAAGG CATGATAGAA ATCAGAAAAC TTATCAAGGC ACTTGCAGAG
AACGAAAAGA CAACATTCTT TATTTCAAGC CATCTTATCC ATGATGTGGA AATAACATGT
AACAGGATTG GAATACTGTA CGACGGAAAA CTGGTTAATG TGGATACAAC CGAAAACATA
CTTAAAAACT TTGCTTCACT GGAGAACTAT TTTGTAAGCG AGGTAGGTAA AAATGAAAGC
GTTTAA
 
Protein sequence
METVLEIKGL TKLYKNGRGI FDINLEVYRG DVFGFLGPNG AGKTTAMKIM TGLMHPNSGD 
VKIFGHSVIT EFEQAMKKVG CIIETAESYA YLTPYENLKL FARFYDDVDD KRIDEVLELT
GILKFKKEKV KNFSLGMKQR LGLAAAILSR PELVILDEPL NGLDVEGMIE IRKLIKALAE
NEKTTFFISS HLIHDVEITC NRIGILYDGK LVNVDTTENI LKNFASLENY FVSEVGKNES
V