Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_3066 |
Symbol | |
ID | 4809940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 3607660 |
End bp | 3608385 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640108490 |
Product | ABC transporter related protein |
Protein accession | YP_001039455 |
Protein GI | 125975545 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACTG TACTTGAAAT AAAGGGACTT ACCAAATTAT ATAAGAATGG AAGAGGAATT TTTGATATAA ATCTTGAAGT ATACAGAGGG GATGTGTTTG GATTCCTCGG CCCCAACGGT GCGGGAAAGA CTACCGCTAT GAAAATTATG ACGGGTCTTA TGCATCCGAA CAGCGGAGAC GTAAAAATTT TCGGGCACAG CGTTATAACC GAATTTGAAC AGGCCATGAA GAAAGTGGGC TGTATAATTG AAACTGCGGA ATCCTATGCA TATCTTACAC CTTATGAGAA TTTAAAACTT TTTGCTAGAT TCTATGATGA CGTGGATGAT AAAAGAATTG ATGAAGTCCT GGAGCTCACC GGCATTCTTA AGTTCAAAAA AGAAAAAGTG AAGAATTTTT CTCTTGGTAT GAAGCAAAGG CTCGGGTTGG CTGCGGCAAT TTTGTCAAGG CCCGAATTGG TGATATTGGA CGAGCCGTTA AATGGACTTG ACGTGGAAGG CATGATAGAA ATCAGAAAAC TTATCAAGGC ACTTGCAGAG AACGAAAAGA CAACATTCTT TATTTCAAGC CATCTTATCC ATGATGTGGA AATAACATGT AACAGGATTG GAATACTGTA CGACGGAAAA CTGGTTAATG TGGATACAAC CGAAAACATA CTTAAAAACT TTGCTTCACT GGAGAACTAT TTTGTAAGCG AGGTAGGTAA AAATGAAAGC GTTTAA
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Protein sequence | METVLEIKGL TKLYKNGRGI FDINLEVYRG DVFGFLGPNG AGKTTAMKIM TGLMHPNSGD VKIFGHSVIT EFEQAMKKVG CIIETAESYA YLTPYENLKL FARFYDDVDD KRIDEVLELT GILKFKKEKV KNFSLGMKQR LGLAAAILSR PELVILDEPL NGLDVEGMIE IRKLIKALAE NEKTTFFISS HLIHDVEITC NRIGILYDGK LVNVDTTENI LKNFASLENY FVSEVGKNES V
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