| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_3049 |
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| Symbol | |
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| ID | 4811121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 3575203 |
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| End bp | 3576978 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640108470 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001039438 |
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| Protein GI | 125975528 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000157665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCA CATTAAAATC AATTATCATA ATTTTTATTA TCCTATTCTC CCTTTCTTTA
CTGACTTCCA TATCCTATGC TGACTCAGCC ATGCAATATT TTAGCGAAGG AAACTCTTTA
TTCGAAGCCG GAAAAATTGA GGAAGCAATA CAAAGTTACA ACAAAGCTAT TGAGCTCAAT
CCCAACCTTG CCGAAATTCA CTATAATAAA GGGGTTGCTC TGTTCAATCT GAAAAAATAC
AATGAAGCAA TTGAATCCTA CAACCGTTCA ATTGAATTAG CGCCCAACTT TAAGGAAGCT
TATCTAAACA AATCAATATG TCTGCTGGTT GTCAGCAAAT TTGAAGAAGC TCTCGAAACC
GTCAACAAAT TCATTGAGAT GTCCCCCAAC GAACCTAACG GATACACAGT AAAAGGTTCC
ATCCTGATAA TGATTGAAAA GTATGAAGAA GCTCTGGAAG TATCCAATAA AGTAATTGCC
ATGAATCCTA ATAACCAATC TGTGCTTTCC GTCGCATATT CCAATAAAGG TTATGCTTTA
GTGTGGCTCA AAAAACCCAA AGAAGCCTTG GAAGCATGTA ACAAATCTCT TGAGCTTTCC
GGCGACAATC TTGACGCACA CATAGCCATA AGCTTGGCAC ATTCTTCTTT AGGTAACTAT
GAAGAAGCGG TTAATTGGTG TGACAAAGCC ATTAAAATCG ATCCCAATGC AGTTGAGCCA
TACATTAATA AATCCAACTA TCTTGTAAAT TTAGGAAAAT CCAAAGAAGC GCTTGAATGC
TGTAGCAAAG CATCAGAATT AAACGTTCCT CAAAATCCTG TTTATGAATC AATCATTCTC
ACGAATAAAT CAGCGGCGCT AATTTTTGAA AATAATTACG AAGAAGCCCT TGCGGCAGCT
GAAAAAGCCA TAGAGTTAGA TCCTAAAAAT GCTCTTGCGT ATGTCAACAA AGCCAATGCA
CTAAACATGG CGGGTAGTTA TGATGAAGCT CTTTCATTCA GCGACAAGGC AATCGAAATT
GATCCAGATT GTGGTGAAGC CTATGGCGCA AAAGGAAGTG CACTATTCTA TCTTGGCAGA
TTTGATGAAT CAATAGAGAC ATGCAAAAAG GCCATTGAAT TAAGTCCTGA GAACATTATC
CTTTGTGTTC AGGCATATAC CAATATAGGA AGTTCTTTGT CTGAAAAAGG AATGTACGAA
GAAGCTCTGA AAAATCTTGA TAAAGCTCTT GAGTTGCCGT CAAAAAATGC TAAAGCCATC
TCTATTGCCT ACTCAAACAA AGCCTATGCA CTGATTGGTC TTGAAAAATT TGAAGACGCT
CTGGAATGCG CAAACAAGGC TATTGAAGCT GACCCCAGCA ATGTCATGGG ATATTCCAAC
AAAAGCTCCG TTTTGATGAG ACTTTCCAGA TACAAGGAAG CTCTTGAATG CTGTGATGAG
GCTATCAAGC TAAATATAGC CGATTATGCC GTCTATAATA ACAAAGGACT CGCTTTGGAA
AGTCAGGGCA AACTTGGCAA AGCATTGGAA GCGTTCAACA AAAGTCTTGA ACTCAATCCT
GACTATAAAA ATGCCCAAGA CAACATCCAA AGAGTCTCAA CAAAACTTAC TATAAGAAGA
GTCTTACTCA TTTTTGGTAT ATTTGCATTT GTTACGGCAA TAACTATAGC CACCGTAATT
TTCATTGTTT TAAGAAAAAG AAAAACCACA GTACAAAGCA TCAATCCGCC CATGCCCGAA
CCGTTTCTCA ACTACGATGA ACTGAATCAA AAATAA
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| Protein sequence | MKTTLKSIII IFIILFSLSL LTSISYADSA MQYFSEGNSL FEAGKIEEAI QSYNKAIELN
PNLAEIHYNK GVALFNLKKY NEAIESYNRS IELAPNFKEA YLNKSICLLV VSKFEEALET
VNKFIEMSPN EPNGYTVKGS ILIMIEKYEE ALEVSNKVIA MNPNNQSVLS VAYSNKGYAL
VWLKKPKEAL EACNKSLELS GDNLDAHIAI SLAHSSLGNY EEAVNWCDKA IKIDPNAVEP
YINKSNYLVN LGKSKEALEC CSKASELNVP QNPVYESIIL TNKSAALIFE NNYEEALAAA
EKAIELDPKN ALAYVNKANA LNMAGSYDEA LSFSDKAIEI DPDCGEAYGA KGSALFYLGR
FDESIETCKK AIELSPENII LCVQAYTNIG SSLSEKGMYE EALKNLDKAL ELPSKNAKAI
SIAYSNKAYA LIGLEKFEDA LECANKAIEA DPSNVMGYSN KSSVLMRLSR YKEALECCDE
AIKLNIADYA VYNNKGLALE SQGKLGKALE AFNKSLELNP DYKNAQDNIQ RVSTKLTIRR
VLLIFGIFAF VTAITIATVI FIVLRKRKTT VQSINPPMPE PFLNYDELNQ K
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