Gene Cthe_3038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_3038 
Symbol 
ID4811110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp3562569 
End bp3563276 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content39% 
IMG OID640108459 
Producthypothetical protein 
Protein accessionYP_001039427 
Protein GI125975517 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0459067 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCAAGCA TCGTAATTTT CTGTACCGGA GTTATTGCCG GTTCTTCGCT GACAACCGAG 
ATTAAAGCCG TATTAAGCCG GGAAGTTACG GTCAGATATG GCGGAGAAGT ACAACATATG 
AAAGACGGCT TGGGAAATCC GGTGTATCCG ATTATTTACA ACGGAACTAC TTATCTTCCC 
ATTCGTGCAG TCAGCAATAT GCTGGATATA CCTGTGGCAT GGGATGCAAC TACTAAAACG 
GTCATTCTTG GAACGGAAGA AAAGCCGCCC AGAAGTGTAT TAAAGTTTGT AGCAAAAACT 
TCTGACCTTG CCAGCAAAGT AACAGATAAG GATTCATTAA GAGTAAAAGA TAGCTCGGGA 
AAGGAATTTG TATATAATGA TGGAATAAGC TATAGAATGG CGTCTGGGGT TTGGTCTGCA 
AATATTGATT CTTCATATAA AGCCAAAATA GGTGGAACTT ATAGCAAGCT GTCTTTTGAT 
GTATATATAG ATGCTTTCGA CAATTATAAA GACGATGAAT TTGTAGTGTA TGTTTATAAT 
GTTGATACCG AGGGAAAATT GGCGGATATA AGAGTTGCCG CAGGAGAAAT TAAAAAAGTT 
GAAGATATAG ACATAACAGG AGTGGATACA TTAGGATTTA CGGCGAAATG TGTTAAAGGT 
TATGGCTATG CAGGTAATGC ATATTTTTTC AATCCTACCG TAAGATAA
 
Protein sequence
MASIVIFCTG VIAGSSLTTE IKAVLSREVT VRYGGEVQHM KDGLGNPVYP IIYNGTTYLP 
IRAVSNMLDI PVAWDATTKT VILGTEEKPP RSVLKFVAKT SDLASKVTDK DSLRVKDSSG 
KEFVYNDGIS YRMASGVWSA NIDSSYKAKI GGTYSKLSFD VYIDAFDNYK DDEFVVYVYN 
VDTEGKLADI RVAAGEIKKV EDIDITGVDT LGFTAKCVKG YGYAGNAYFF NPTVR