Gene Cthe_3007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_3007 
Symbol 
ID4811155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp3531062 
End bp3531754 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content44% 
IMG OID640108428 
ProductErfK/YbiS/YcfS/YnhG 
Protein accessionYP_001039396 
Protein GI125975486 
COG category[R] General function prediction only 
COG ID[COG3858] Predicted glycosyl hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCCGT ACTATCAAAG GCAGTGTCCC ACAGGTTCGG TTCCCTATAC GATAAAAGCC 
GGAGACACAC TGGCTGCCAT AGCAAGAATA TACGGGACCA CAGTACAGGA CATTATTAAT 
GCAAACCCTG ATATTGATCC CTATTATTTA AGAGTAGGTC AGCAAATATG TATTCCGCTA 
ACCATGCAAA TATATCCTTC GTGTCCGACA ACAAACTATT ATGTGGTAAG GCCGGAAGAC 
ACTTTGGAGT CAATAGCGGC TTACTTTAAC ATAACTCCCC AACAGTTATT GTATTCAAAC 
TACGGAATAG ACCCCACTGA TTTATACGTG GATCAAATTC TATGCATACC TGTAGCTCCT 
CCCCCCGTCA CCGTTAATGT CAACGTGGCG GAACGAACTC TTACAGTATA CCGCGACGGA 
AGAATTTACA GAACATACAG AATTGCTTTG GAAAATCCGG CGTCACCCAT TCCAAGAGGA 
ACATTTACGG TTTTAAACAA ACAGGTTGAT CCCGGTGTTG AGATGGGAGC AAGATGGATT 
GGACTTTCTG AAGCAGGTTT TGGAATTCAT GGCACAAACA CACCGGAATT TATTGATGTC 
GTCTCCACCG GCAACAGTAT AGTCATGTCC AACGAGGATG TAAGCGAGCT GTTTAATCTT 
GTACCTGTGG GAACAATCGT AACCATATCC TGA
 
Protein sequence
MFPYYQRQCP TGSVPYTIKA GDTLAAIARI YGTTVQDIIN ANPDIDPYYL RVGQQICIPL 
TMQIYPSCPT TNYYVVRPED TLESIAAYFN ITPQQLLYSN YGIDPTDLYV DQILCIPVAP 
PPVTVNVNVA ERTLTVYRDG RIYRTYRIAL ENPASPIPRG TFTVLNKQVD PGVEMGARWI 
GLSEAGFGIH GTNTPEFIDV VSTGNSIVMS NEDVSELFNL VPVGTIVTIS