Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2939 |
Symbol | truA |
ID | 4810222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 3454388 |
End bp | 3455122 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640108362 |
Product | tRNA pseudouridine synthase A |
Protein accession | YP_001039330 |
Protein GI | 125975420 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0101] Pseudouridylate synthase |
TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGAACG TGAAGCTTAT TATTGAATAT GACGGTACCA ATTATCATGG CTGGCAAAAG CAGAAGAATG CAAAAACGGT GCAGGATACA ATTGAAAGGG CGATAAAGGG ACTCACCGGG GAGAAGGTTG ATCTTATAGG TGCGAGCAGA ACTGACTTTG GAGTGCACGC ATTGGGGCAG GTGGCAAATT TCATAACCAA CTCCGGCATA CCGGGTGACA GGTTCTCTTA TGCCTTAAAC AGAATGCTTC CTGATGACAT AGTAATAAAA GAATCACAGG AAGTGGACAT GGATTTTCAT GCAAGATACA AAGCAAAGGG AAAAAGATAC AGGTATTTGA TTTACAACTC ACAGTTTCCG TCTGCGCTTT TAAGACACAG GACCTATCAT GTGTCTCACA AACTGGATTT TGAAAGTATG CAAAGGGCAG CATCGTATTT TTTGGGGACC CATGATTTTT CCGCCTTCAG ATCAAGCGGC AGCAGTGCAA AAACGTCTGT GAGGACAATT ACGGATGTTT CGCTTGAAAG GGAGGACAAA ATAGTAAAGT TTGAGATAGC CGGGGACGGA TTTTTGTACA ACATGGTGAG AATAATAGTC GGAACTTTGA TGGAAGTAGG CATTGGAAAG ATAAGAGCCG ATGAGATACC ACAGATAATC GAAAGCCGTA AAAGAAAAAG AGCGGGAAGG ACGGCCCCGG CGGAAGGGTT GTATCTGGTG GAGGTTTATT ATTGA
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Protein sequence | MRNVKLIIEY DGTNYHGWQK QKNAKTVQDT IERAIKGLTG EKVDLIGASR TDFGVHALGQ VANFITNSGI PGDRFSYALN RMLPDDIVIK ESQEVDMDFH ARYKAKGKRY RYLIYNSQFP SALLRHRTYH VSHKLDFESM QRAASYFLGT HDFSAFRSSG SSAKTSVRTI TDVSLEREDK IVKFEIAGDG FLYNMVRIIV GTLMEVGIGK IRADEIPQII ESRKRKRAGR TAPAEGLYLV EVYY
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