| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2929 |
|---|
| Symbol | rpsM |
|---|
| ID | 4810212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 3446388 |
|---|
| End bp | 3446759 |
|---|
| Gene Length | 372 bp |
|---|
| Protein Length | 123 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640108352 |
|---|
| Product | 30S ribosomal protein S13 |
|---|
| Protein accession | YP_001039320 |
|---|
| Protein GI | 125975410 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0099] Ribosomal protein S13 |
|---|
| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000000141788 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGTA TTGCCGGAGT CGATTTGCCC AGGGAGAAAA GGGTGGAAAT CGGGTTAACC
TACATCTTTG GAATTGGCAG AACTTTGTCC AATGAGATTT TGCGCAAAAC AGGTATAAAC
CCGGATACAA GAGTTAAGGA TCTGACGGAT GAAGAAATCA GCAAACTCAG AGAAGTAATA
GATAAAGAAT ACAAGGTTGA AGGAGATTTA AGAAGGGAAA TTGCTCTTAA CATTAAAAGA
CTGATGGAAA TTGGATGTTA CAGAGGCAGA AGACACAGAG CGGGTCTGCC GGTTCGCGGT
CAAAGAACCA AGACTAATGC AAGGACAAGA AAGGGTCCGA AGAAAACTGT CGGAGTGCAG
AGGAAGAAAT AG
|
|---|
| Protein sequence | MARIAGVDLP REKRVEIGLT YIFGIGRTLS NEILRKTGIN PDTRVKDLTD EEISKLREVI
DKEYKVEGDL RREIALNIKR LMEIGCYRGR RHRAGLPVRG QRTKTNARTR KGPKKTVGVQ
RKK
|
|---|
| |