Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2888 |
Symbol | |
ID | 4809095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 3414245 |
End bp | 3415006 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640108307 |
Product | imidazole glycerol phosphate synthase subunit HisF |
Protein accession | YP_001039279 |
Protein GI | 125975369 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCACAA AAAGAATAAT TCCCTGCCTG GACGTTCACA ACGGCAGGGT GGTAAAGGGA GTCAATTTTG TGAATATAAG AGATGCCGGA GATCCGGTTG AGATTGCGTC CTATTATGAC AAAGCCGGCG CTGACGAACT TACTTTTCTT GACATAACTG CTTCGGCGGA AGCCAGAAAC ATCATGATTG ATGTGGTAAG AAGGGTTGCA GAGCAGGTTT TTATTCCCTT CACTGTGGGG GGTGGAATAA GAACCGTTGA GGATTTCAGG GAGATTTTAA AAGCCGGTGC GGACAAAGTA TCCATTAATT CCGCTGCGGT AAAAAGGCCT GAGCTGATAT CGGAAGCCGC ATCCCGTTTT GGAAGTCAGT GCGTGGTGGT TGCGATTGAT GCGAAAAGGC GCGACGACAA TTCCGGTTGG GATGTGTATA TTAACGGAGG AAGAATCAAT ACCGGAAAAG ATGCCGTGGA ATGGGCTGTG GAGGTTGAAA AACTCGGTGC CGGGGAGATT CTTCTTACGA GCATGGACTG TGACGGTACG AAAAAAGGAT ATGACATTGA GCTTACCAGA AAGGTGTCGG AAAGTGTAAG GATTCCTGTT ATTGCATCGG GCGGTGCCGG TACCATGGAG CATTTCCGTG AAGCATTAGT TGAGGGAAAG GCCGACGCTG TGCTGGCTGC ATCTCTGTTT CACTACAGAG AGATAGAAAT AATGGAACTA AAAAAATATT TGAAGGAGAA CGGAATAGAA ATAAGAATGT AG
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Protein sequence | MVTKRIIPCL DVHNGRVVKG VNFVNIRDAG DPVEIASYYD KAGADELTFL DITASAEARN IMIDVVRRVA EQVFIPFTVG GGIRTVEDFR EILKAGADKV SINSAAVKRP ELISEAASRF GSQCVVVAID AKRRDDNSGW DVYINGGRIN TGKDAVEWAV EVEKLGAGEI LLTSMDCDGT KKGYDIELTR KVSESVRIPV IASGGAGTME HFREALVEGK ADAVLAASLF HYREIEIMEL KKYLKENGIE IRM
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