| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2847 |
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| Symbol | |
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| ID | 4809127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 3362822 |
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| End bp | 3364975 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640108267 |
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| Product | P4 family phage/plasmid primase |
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| Protein accession | YP_001039239 |
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| Protein GI | 125975329 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3378] Predicted ATPase |
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| TIGRFAM ID | [TIGR01613] phage/plasmid primase, P4 family, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.318392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAATGA TGGACGCGGC ATTAAAATAC GCAGAAGCCA ATATCCCAGT TATACCTCTG
CACTGGATTT GTGAGGATGG CTCCTGCTCC TGCAAGGCAG GGAGCGATTG CGACAGCAAG
GGAAAGCATC CGTTATATAC CGGCTGGTAC AAGAACTCCA CTACTGATGT TGAGCAAATA
AAGAAATGGT GGACGAAAAC CCCCAATGCC AATATCGGAA TTCCTACAGG TGAGAAATCC
GACTGGCTGG TGCTTGATGT GGACGATGGT GGTGATGAAA CCCTATCTGC ACTTGAGGCA
ACACATGGAA AACTTCCGGA TACGGTTACT GCTGTTACAG GAAGTGGAGG TCGGCACTAT
GTATTTATAT ACCCTAAAGG CCGGAGTATT CCTAATAAGA CCAAGTTTGC ACCGGGTCTT
GATATGCGTT CAACAGGTGG ATTGATTGCC GTAGCTCCAA GCATTCATAT AAGCGGTAAT
CGGTATGAAT GGTTAGAAGG ACATTCTCCC TTTGAGAGAA TCCCGGCAGA AGCTCCAGCA
TGGTTGTTGA AGCTCATGGA AAGGGTGGAA GTATTGCTTA CACCCTTTGA AGGTAGCAGT
ATTATTGCCG AGATTAAGGA AGGAAACCGC AACAGTACCC TGACAAGCCT TGCCGGAACC
ATGAGGGCAA GAGGAATGAC AGAAGAGAGC ATCTATGCGG CATTGCTTGC AGAAAACAAC
GCAAGGTGCA ATCCTCCGCT TGATGAAGCG GAAGTTAGAA AGATAGCGCA CAGTGTCAGC
CGATACCAGC CAAATCCTCC GATGAAGAAG CATTACCACA GGACAGACAG CGGGAATGCA
GAAAGGCTGC GTGACAGGTT TGGTGAAATC ATTAGGTATT GTCCGGCTTT CAAATACTGG
TTGGTATATG ACGGCTGTTG CTGGAGGAAA GAAACCGGAG AACTTATGCA GTTTGCTATA
AAAACAGCAA GAGACATGCT CGCAGAAGCA AGCCGGATAG AGGATGAGGC TGCAAGAAAA
GAACTGGTGC GCCATGCCAT GCAGTCTGAA AACGCAGGCA GGCTTAAAGC CATGATCGAT
GTGGCTTCAA ACCTTGAAGG AATGGTAATT ATGCCGGATG AGATTGATTC TGATATATGG
AAGCTGAACT GTAGAAATGG TGTGGTAGAC CTAAAGACAG GCGAACTCCT TCCTCATAAG
CGGGAGTACT ATATGAGCAA AATCTGCCCT GTTGAATATA AACCAAGCAG CAAGGCTCCC
AAATGGATGG AATTTCTGAA TACCATTACG GGAGGAAGCA AGGAGCTTGT AAGATACCTT
CAAAAAGCTG TAGGCTCGTC ATTAAGCGGG GATATTTCAG AGCAGGCCCT ATTCGTCCTT
TATGGAACAG GAGCAAACGG AAAGAGCACA TTTCTAAACA CCATCTCTGA CCTGTTGGGA
GACTATGCAA GAAATACTCC GTCCGAAACT TTTATGGCTA AAAGAATAGA AGCGATAGGA
AATGATATCG CAAGGCTTCA GGGAGCAAGG CTCGTTACTG CCATAGAAAT AAATGAGGGA
CAAAGGCTCT CTGAGGCATT GATTAAGAGC TTTACAGGCG GAGACAGAAT TACAGCAAGG
TTTCTTTATG GAGAATACTT TGATTTCCAG CCACAGTTCA CCCCGTTTCT CGTAGTAAAC
CACAGACCAG TCATAAGAGA TACCAGCCAC AGCATTTGGA GGCGCATTAA GCTGATTCCT
TTCACCGTTA CCATACCCGA GGATAAAAAG GATAAGCAGC TACCGGCAAA GCTGAGAGAA
GAGCTGCCTG GCATATTGTC ATGGGCAGTA GAGGGTTGCC TTCTTTGGCA GAAGGAAGGA
CTAAATATGC CTGATGAAGT CAAAAAAGCC ACAGAAGGTT ACCGGGAGGA AATGGATACC
TTCTCAAGTT TTATAGAGGA ATGCTGCATT GTGGAGGAGG GCAGGAAAGT CTCCAATAGA
AGCATCAGGT ACGCTTACGA AACATGGTGC CGGGAAAATG GAGACTACCC TCTTGGACAA
AAGCTATTCA ATGCAAAAAT GACGGAGCGC GGCTTTGCTG TCAAACGCAG CGGAGCCAAT
GGCAGCAGGG ACTGGCATGG TATTGGTCTT GCGGATGAGG GGATACTTTT GTGA
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| Protein sequence | MTMMDAALKY AEANIPVIPL HWICEDGSCS CKAGSDCDSK GKHPLYTGWY KNSTTDVEQI
KKWWTKTPNA NIGIPTGEKS DWLVLDVDDG GDETLSALEA THGKLPDTVT AVTGSGGRHY
VFIYPKGRSI PNKTKFAPGL DMRSTGGLIA VAPSIHISGN RYEWLEGHSP FERIPAEAPA
WLLKLMERVE VLLTPFEGSS IIAEIKEGNR NSTLTSLAGT MRARGMTEES IYAALLAENN
ARCNPPLDEA EVRKIAHSVS RYQPNPPMKK HYHRTDSGNA ERLRDRFGEI IRYCPAFKYW
LVYDGCCWRK ETGELMQFAI KTARDMLAEA SRIEDEAARK ELVRHAMQSE NAGRLKAMID
VASNLEGMVI MPDEIDSDIW KLNCRNGVVD LKTGELLPHK REYYMSKICP VEYKPSSKAP
KWMEFLNTIT GGSKELVRYL QKAVGSSLSG DISEQALFVL YGTGANGKST FLNTISDLLG
DYARNTPSET FMAKRIEAIG NDIARLQGAR LVTAIEINEG QRLSEALIKS FTGGDRITAR
FLYGEYFDFQ PQFTPFLVVN HRPVIRDTSH SIWRRIKLIP FTVTIPEDKK DKQLPAKLRE
ELPGILSWAV EGCLLWQKEG LNMPDEVKKA TEGYREEMDT FSSFIEECCI VEEGRKVSNR
SIRYAYETWC RENGDYPLGQ KLFNAKMTER GFAVKRSGAN GSRDWHGIGL ADEGILL
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