| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2769 |
|---|
| Symbol | |
|---|
| ID | 4810086 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 3271107 |
|---|
| End bp | 3271862 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640108189 |
|---|
| Product | protein of unknown function DUF542, ScdA-like protein |
|---|
| Protein accession | YP_001039161 |
|---|
| Protein GI | 125975251 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG2846] Regulator of cell morphogenesis and NO signaling |
|---|
| TIGRFAM ID | [TIGR03652] iron-sulfur cluster repair di-iron protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.381543 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCAAAAG TCACTGATGA AATAACAATA TTAATTGTAC AAGGAGGATA TTATATGAAT
ACATTCAGCA TTTCACAAAG AGTCGGAGAA ATTGCAGCTA TTATGCCAAA AGCAAGCGAG
GTTTTCAGAG AATTTAACAT TGATTTTTGC TGCGGCGGCC ATAGAACTCT TGCCGAAGTA
ATAAAAACAG AAAACATAGA TGAACAGCAA TTATTAAAAA AACTGGAGGA CGCTTACGAG
GAATCCAGGA GTATTTTAAA TCAGACTAAT TTTACGGAAA TGTCATCAAC CAAGTTGATT
GATTATATAA TAAACACGCA CCATGTTTTT TTGAGAAAGA CTCTTCCCAG GCTTAGTGAG
CTTACAACAA AGATATTAAG AGTCCACGGT TCAAACCATG AGAGCCTCTT TAGGGTTCAC
AAGCTCTTTC ACAGCCTTAA GGCAGAACTG GAGCAGCATT TGATTAAAGA AGAAGAAATT
CTTTTCCCGG TCATCAGGGA ATATGACGCT AATCCGTCAA GCGAACTGCT AAACAAAATT
TCTGCCGTCA TGAAGGAAAC GGAAGATGAG CACGATGCAG CAGGCGGTAT TTTGAAAGAG
CTAAGGAAAG TAACCAATGA TTACAGCGTT CCGGAGGACG GCTGCAATAC CTATCGCAGA
GCCTTTGACA AGCTTGAGGA ACTTGAAGCC GACTTATTCC GGCATATACA CCTTGAAAAT
AACATTCTGT TCAGGCGCTT TGACACGGTA CAATAA
|
|---|
| Protein sequence | MAKVTDEITI LIVQGGYYMN TFSISQRVGE IAAIMPKASE VFREFNIDFC CGGHRTLAEV
IKTENIDEQQ LLKKLEDAYE ESRSILNQTN FTEMSSTKLI DYIINTHHVF LRKTLPRLSE
LTTKILRVHG SNHESLFRVH KLFHSLKAEL EQHLIKEEEI LFPVIREYDA NPSSELLNKI
SAVMKETEDE HDAAGGILKE LRKVTNDYSV PEDGCNTYRR AFDKLEELEA DLFRHIHLEN
NILFRRFDTV Q
|
|---|
| |