Gene Cthe_2652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2652 
Symbol 
ID4808963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp3134379 
End bp3135047 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content40% 
IMG OID640108065 
Productlipopolysaccharide biosynthesis 
Protein accessionYP_001039044 
Protein GI125975134 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3944] Capsular polysaccharide biosynthesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAACTTA AGCAGTTTCT GATAATGGTG AGAAAAAAGT TGATGTTTAT TATTTTAATT 
CCGATTATTG CGGCTTTTAT TATCGGTTTG GCAAGTGTCC TTTTTATCCC GCCCGTATAT 
GAGGCATCTA CGACTTTATA TATAATCAAT CAGAACGCAG TTTCCGAAGA GGATGTGACT 
TATAATGAAC TGCTGAAAAA TCAGCAGTTG GTAAAAGATT ACAGAGAGCT TATAAAAAGC 
AAGCTCATTG TCAAAACTGC GTTGGAAGAA CTGGAAATAA CCGATATGTC TCCTGAACGA 
TTGGCTGCAA ATATCACCGT GGACTCAAAA AATGACACCA GGATATTGGA AGTAAAGGTA 
AGAGACACTT CCCCCGAAAG AAGCATGCAA CTTTCAAACA AGATTTGCGA AGTGTTTGTA 
AGAGAGTCCG TAAACATCAC AAAAACAGCC AACGTAAGCA TTGTTGACGC CGCTGAAGTC 
CCAAAAGGTC CGGTGGAGCC CAAACCCATG TTTTATGCGT TAGTAGCGTT TTTAGTAAGC 
CTTTGTGCAA CCATAGGTGC GTTTTACCTG TTTGAATTAT TGAACGAGAC CATCAAAAAT 
TCTGAGGACG TGGCAACATA TCTGGAACTG AACGTGCTTG GGACCATACC TTTGTTTAAC 
ATCAAGTAG
 
Protein sequence
MELKQFLIMV RKKLMFIILI PIIAAFIIGL ASVLFIPPVY EASTTLYIIN QNAVSEEDVT 
YNELLKNQQL VKDYRELIKS KLIVKTALEE LEITDMSPER LAANITVDSK NDTRILEVKV 
RDTSPERSMQ LSNKICEVFV RESVNITKTA NVSIVDAAEV PKGPVEPKPM FYALVAFLVS 
LCATIGAFYL FELLNETIKN SEDVATYLEL NVLGTIPLFN IK