Gene Cthe_2602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2602 
Symbol 
ID4809024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3073152 
End bp3073907 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content39% 
IMG OID640108016 
ProductF0F1 ATP synthase subunit A 
Protein accessionYP_001038995 
Protein GI125975085 
COG category[C] Energy production and conversion 
COG ID[COG0356] F0F1-type ATP synthase, subunit a 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00882064 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGAGT TTGCAAATGA ATTACAGGAA TTAATAAAGC CAAATAAAAT TATCAACTTT 
TCTGTTTTTG GTTTTGACAT GTCCATTACC GATTCTGTGA TCATGATGTG GATTGTGATG
GCTTTTCTTA TAATTTTTTC TCTTGTTTTT ACAAGAAAGC TCAAAACAAT CCCGGAGGGT
AAACAAAATG TAGTTGAGGT CATTGTGGAG TTCATATATA ACTTTGCGAA AGATTCCATG
GGCCACAACG GGAAGCTGTT TGCTCCGTAT ATAGGCACGG TTTTGCTGTT TTTGATTGTT
TCCAACATGG CAGCTATTTT TAACGTCATT CCCTCCAGTG AAGATATTTA TCACTGGACA
GGAATAGAAT ATTTCAAGGA TTTGAATTTT GCCATAAGGC CCCCTACAAA AGATGTAAAC
GTAACATTGA CGCTGGCTTT GATGTCAATG GTTGCGGTGG CTCTGGCCGG AATAAGGGTA
AAAAAGGTGT CGGGCTGGCT GAAGAGCTTT TTTGAGCCTG TGCCTTTGAT GCTTCCTTTT
AAGATGCTTG ACTATGTGAT AAGGCCTGTG TCGCTGTGCT TCCGTATGTT TGGAAATATC
CTGGGGGCCG TAATTATTAT GGAACTTGTG TATTTTGCAT TCCCGGCTGT TTTACCGGCG
TTTTTAAGCA TATATTTTGA TTTGTTTGAC GGTATTCTGC AGGCTTATGT ATTTGTATTT
CTGACTTCGA TTTACATGGG TGAAGCGGTT GAGTAA
 
Protein sequence
MGEFANELQE LIKPNKIINF SVFGFDMSIT DSVIMMWIVM AFLIIFSLVF TRKLKTIPEG 
KQNVVEVIVE FIYNFAKDSM GHNGKLFAPY IGTVLLFLIV SNMAAIFNVI PSSEDIYHWT
GIEYFKDLNF AIRPPTKDVN VTLTLALMSM VAVALAGIRV KKVSGWLKSF FEPVPLMLPF
KMLDYVIRPV SLCFRMFGNI LGAVIIMELV YFAFPAVLPA FLSIYFDLFD GILQAYVFVF
LTSIYMGEAV E