Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2597 |
Symbol | |
ID | 4809019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 3068880 |
End bp | 3069329 |
Gene Length | 450 bp |
Protein Length | 149 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640108011 |
Product | ribose-5-phosphate isomerase |
Protein accession | YP_001038990 |
Protein GI | 125975080 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family [TIGR01120] ribose 5-phosphate isomerase B |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0696545 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTG GAATTGGAAG CGACCACGGA GGTTACAATT TAAAAAGGGA GATAGCCGAT TTTCTAAAAA AAAGAGGTTA TGAAGTCATA GACTTTGGAA CACACGGAAA TGAGTCGGTG GATTATCCGG ATTTCGGACT TAAGGTTGCA GAGGCTGTAA AAAGCGGCGA GTGTGACAGG GGTATTGTAA TATGCGGTAC CGGACTTGGC ATATCAATAG CTGCAAACAA GGTTCCGGGC ATCAGAGCTG CCGTATGCAC CAACAGTTAC ATGGCAAGAA TGAGCAGGGA ACACAATGAT GCCAATATCC TGGCTTTGGG AGAAAGAGTT GTGGGACTTG ATCTTGCTTT GGATATTGTT GACACTTGGC TCAAAGCTGA GTTCCAGGGA GGAAGACATG CCACCAGGGT TGGCAAAATC GGTGAGATTG AAAAAAAATA CAGCAAATAG
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Protein sequence | MKIGIGSDHG GYNLKREIAD FLKKRGYEVI DFGTHGNESV DYPDFGLKVA EAVKSGECDR GIVICGTGLG ISIAANKVPG IRAAVCTNSY MARMSREHND ANILALGERV VGLDLALDIV DTWLKAEFQG GRHATRVGKI GEIEKKYSK
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