| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2580 |
|---|
| Symbol | |
|---|
| ID | 4809187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 3053527 |
|---|
| End bp | 3054012 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640107994 |
|---|
| Product | phosphodiesterase |
|---|
| Protein accession | YP_001038973 |
|---|
| Protein GI | 125975063 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0622] Predicted phosphoesterase |
|---|
| TIGRFAM ID | [TIGR00040] phosphoesterase, MJ0936 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAATAG GAGTGGTATC GGACACCCAT GTGGGGGGAA GGATAAAAAG TCTTCCGAAA
GAACTTTTAG ACGGGCTTCG TGGAGTGGAC CTTATAATTC ATGCCGGGGA TATTTTAAAG
GACTTTGTGA TATATGAACT GGAAGAGATA GCACCGGTTG AGGCTGTGGC GGGAAATAAC
GATGATTATT ACATGCAGCA CAAACTCGGT GTCAAAAAGA TAATAAATGC AGGTAAATTT
AAAATAGGCA TAACTCATGG ATACGGGGGA GTCAATGCGT TAAAAAAGGC AATGGCGACG
TTTGCGAGAG ACAGTGTGGA TTGTGTGGTA TTTGGACACA GCCACGCACC TTATAATGAA
AGGATAGACG GAGTATTATA TGTAAATCCC GGCTCGCCCA CAGATAAAAG GTTTCAAAAA
CAGTATTCAT ACGCACTCTT AAAGGTGGAT GATTCGGGGA TTTCGGCGGA GATTAAATAT
TTTTAG
|
|---|
| Protein sequence | MIIGVVSDTH VGGRIKSLPK ELLDGLRGVD LIIHAGDILK DFVIYELEEI APVEAVAGNN
DDYYMQHKLG VKKIINAGKF KIGITHGYGG VNALKKAMAT FARDSVDCVV FGHSHAPYNE
RIDGVLYVNP GSPTDKRFQK QYSYALLKVD DSGISAEIKY F
|
|---|
| |