| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2516 |
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| Symbol | |
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| ID | 4809272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 2984630 |
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| End bp | 2986258 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640107932 |
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| Product | acetolactate synthase, large subunit |
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| Protein accession | YP_001038911 |
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| Protein GI | 125975001 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000744784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTTT CAGGTGCGCA GGCAATTGTG AAAGCTTTGG AATTGGAAGG CGTGGAAGTT
GTTTTCGGTT ATCCGGGAGC TGCAATTTGT CCTTTCTATG ATGCGCTGAT GGAATCTAAA
ATAAGGCATA TACTCACCAG GCATGAACAG GGAGCTGCCC ATGCCGCCAG CGGATATGCC
AGAACAACGG GAAGGGTTGG TGTGTGTGTT GCCACATCAG GACCGGGAGC AACCAACCTT
ATTACAGGCA TTGCTGACGC ATACATGGAC TCAATACCGT TGGTGGCCAT CACCGGGCAG
GTTAATTCGG AGCTGATTGG AAGAGACGTG TTCCAGGAGG CTGACATTAC CGGCGCGACG
GATCCTTTCT GCAAGCATAA TTATTTGGTA AAAAACGCAA AGGATTTGCC CCGGGTTTTA
AAGGAAGCCT TTTACATAGC ATCCACCGGA AGGCCGGGCC CTGTTCTTAT CGACGTACCC
ATAGACGTGC AGACAAAAGA GATTAATTTT GAGTACCCGG AAAGTGTTGA TATAAAAGGC
TACAAGCCAA ATTTAAAAGG CCATTCTCTT CAGATAAAAA AGATTGCTCA AGCTATTGAA
AAGGCAAAAA AACCGGTTAT TTGCGCCGGG GGAGGAGTGA TTAATTCCAA TGCATCCGAG
GAGCTTTTAA CTCTTTCCCG AAAGTGCGGC ATACCTGTTG TTACAACTTT GATGGGTATC
GGGTCCGTGC CGTATGATTA TGAGCTCAAT TTAGGAATGC TTGGGACTCA CGGAGTATAT
ATTGCGAATT ATGCCGTAAA CAATGCTGAC CTTTTGATTA TCATCGGCGC GAGGGTTGCG
GACAGGGCTA TAAGCAATCC CCAGCAGGTT GCAAAGAGAA AGCAGATAGT TCATATTGAC
ATAGATCCTG CGGAGATAGG CAAAAATATC GATGTTTCAA TACCGGTGGT AGGAGATGTG
AAGCAGGTAT TAAAAGAGCT TATAGATATT TCCCAAAAGG GAGATACGGA AGAATGGATA
AAGACAACTC AAAAAGAAAG AGAAAAACAT GCCGAAAAAC CTGAACCAAG GCCCGGTATA
GGTTTTGTGA ATCCCAAATA TTTGTTGTCT GTTTTGACCG GGCTTTTGGG TGATGATGAT
ATAATTACAA CAGAAGTGGG ACAGAACCAG ATATGGGCTG CAAACTATTT TGGTGTCAAA
AAGCCCCGGA CCTTTATAAC GTCCGGAGGT CTGGGTACCA TGGGATACGG GCTTCCCGCC
GCGGTGGGGG CAAAAATTGG CTGTCCCGAC CGCAAAGTGG TATGTGTGGG AGGAGACGGG
AGCTTCCAGA TGAACATGCA GGAGCTTGGC ACCATCAAGC AAAACAGGCT GGGAGTGAAA
GTAATCTTAT TCAACAACTC AAGGCTGGGA ATGGTAAGGG AGCTGCAAAA GACAAAGTAC
TGCGGCCGTT ATTTCCAGGT ATTTTTGGAC GACAATCCTG ACTTTATAAA GTTGTTTGAC
GCTTATGGTT TCAAGGGCAG GAGAATAGAC GACGATTCCC AGGTGGAAGA TGCGTTGAAA
GAGATGCTGT CGGACGACAA ACCTTACCTT CTCGAGTGCA AAATTGACCC GGAAGAATCA
ACACTATGA
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| Protein sequence | MKLSGAQAIV KALELEGVEV VFGYPGAAIC PFYDALMESK IRHILTRHEQ GAAHAASGYA
RTTGRVGVCV ATSGPGATNL ITGIADAYMD SIPLVAITGQ VNSELIGRDV FQEADITGAT
DPFCKHNYLV KNAKDLPRVL KEAFYIASTG RPGPVLIDVP IDVQTKEINF EYPESVDIKG
YKPNLKGHSL QIKKIAQAIE KAKKPVICAG GGVINSNASE ELLTLSRKCG IPVVTTLMGI
GSVPYDYELN LGMLGTHGVY IANYAVNNAD LLIIIGARVA DRAISNPQQV AKRKQIVHID
IDPAEIGKNI DVSIPVVGDV KQVLKELIDI SQKGDTEEWI KTTQKEREKH AEKPEPRPGI
GFVNPKYLLS VLTGLLGDDD IITTEVGQNQ IWAANYFGVK KPRTFITSGG LGTMGYGLPA
AVGAKIGCPD RKVVCVGGDG SFQMNMQELG TIKQNRLGVK VILFNNSRLG MVRELQKTKY
CGRYFQVFLD DNPDFIKLFD AYGFKGRRID DDSQVEDALK EMLSDDKPYL LECKIDPEES
TL
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