Gene Cthe_2424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2424 
Symbol 
ID4808140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2896888 
End bp2897718 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content40% 
IMG OID640107838 
Productcopper amine oxidase-like protein 
Protein accessionYP_001038819 
Protein GI125974909 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.223799 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACT TAAAATCTCG TGCCTTTCGT TTCGTCGTCT ACACTACTCT GCTATGTATG 
TTATTCCTAT CAACCACCCT TCAAAGCATA GCGTCTACCA ACGTGAAAGT ATATTTTAAC
GGTAAACTTA TGGAATTCGG AACCAGCGCC AATGACCCGG CTCCTTATAT TAAGGAAGGA
AGGACTCTTA TTCCGTTCCG CAGAATATTT GAAGCCCTGG GTATGGATGT GGGCTGGGAT
CCTGTACTTC GTATGGTCAC AGCCAAAGGC AATGGCATTG AAATGACACT TTACATCGGT
GGAAAAATTG CCATTGTAAA CGGAGAAGAA AAAGAACTTG ATGTACCTGC TGAAATAACG
GACGACAGGA CTTTTGTTCC GTTAAGATTT GTCAGTGAAA ACTGTGGAGC GGTGGTTGCC
TGGGATGACA GCACGAAGTC CGTATACATA ACAATGCCCA ATAACATACC GTCCTCTCCA
GGAGAAGTAT TGCCAACCGT CGAAAGAAAA AGTTTGGGTA GTGAGTTTAA ATATAAAGAC
TTGGCCGTTT CCTTTGACGA AATCATTATC GAAGAAATAG AAAAAACTAA TGACGTTAAA
ATAACTGTAA AAGGCAAAAC CAATATTGAA GATTCCACTT TTATTCTCGA GCTTTATAAT
GCTTCCGGTA GATCTGTCAA AGTCAGAGCT TTTGCTATAC CGTCACAATC TGACACACAT
AAAGTTGTAG GATCTGTTTT TGTCTCAAAA TCTTTTGTGC CGAAAGTAAT GTACGTAACA
ATACCATACA TAGACGAAAG GTATATAAGA ATTGGAATGT ATGATCTCTG A
 
Protein sequence
MKNLKSRAFR FVVYTTLLCM LFLSTTLQSI ASTNVKVYFN GKLMEFGTSA NDPAPYIKEG 
RTLIPFRRIF EALGMDVGWD PVLRMVTAKG NGIEMTLYIG GKIAIVNGEE KELDVPAEIT
DDRTFVPLRF VSENCGAVVA WDDSTKSVYI TMPNNIPSSP GEVLPTVERK SLGSEFKYKD
LAVSFDEIII EEIEKTNDVK ITVKGKTNIE DSTFILELYN ASGRSVKVRA FAIPSQSDTH
KVVGSVFVSK SFVPKVMYVT IPYIDERYIR IGMYDL