Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2404 |
Symbol | |
ID | 4811056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 2871042 |
End bp | 2871734 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640107817 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001038799 |
Protein GI | 125974889 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGGAA AGCTTTCAAA GGTAAATCTG AACAACTATA AACCTTTAAG GGAAGTAATT TTTGATACTC TCAGGGAAGC TATTATTGCA GGTGAGCTAA AGCCGGGAGA AAGACTTATG GAAGTCAAAC TGGCGGAAAA AATGGGAGTC AGCCGTACGC CTGTAAGAGA AGCAATAAGA AAACTTGAGC TCGAAGGGCT GGTCGAGATG CTTCCTCGAA AAGGAGCCCA CGTTGCCGAG CTTTCGGTTA AGGATATTAT GGATGTTTTG GAGGTCAGGG CCACCCTTGA CGGTTTGGCG ACGGCTCTTG CGGCTGAAAG AATAACCGAT GAGGAAATAA AGGAATTGGA ACATGTACAT TCGCAGTTTT TGAATTATGC CAATAAAGAC AATTTGCAGG GTTCGATAAA AAAGGACGTG GAGTTCCACG AGTTAATATA TCGGGCATCC CGGAACGAGA GGCTTATTCA GATTGCAAAC AATTTACGCG AGCAGGTTCA GCGCTTCAGG GTAATATATC TTAAAGATTA CAGCAATCCC AGGGAGCTGA TCAAGGAGCA CCAGTACATC CTTGAGGCCA TCTCAACCCG CGACAAAGCG GCGGCCCAGG AGTATGCACA AAGGCATATA AACCATCAGG AGGCGGCAAT AATAAAGGCG ATAAAAAATA TGAAGGGAGG TGGAGGGGAA TAA
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Protein sequence | MAGKLSKVNL NNYKPLREVI FDTLREAIIA GELKPGERLM EVKLAEKMGV SRTPVREAIR KLELEGLVEM LPRKGAHVAE LSVKDIMDVL EVRATLDGLA TALAAERITD EEIKELEHVH SQFLNYANKD NLQGSIKKDV EFHELIYRAS RNERLIQIAN NLREQVQRFR VIYLKDYSNP RELIKEHQYI LEAISTRDKA AAQEYAQRHI NHQEAAIIKA IKNMKGGGGE
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