Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2400 |
Symbol | |
ID | 4811052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 2866620 |
End bp | 2867495 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640107813 |
Product | peptidase U57, YabG |
Protein accession | YP_001038795 |
Protein GI | 125974885 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02855] sporulation peptidase YabG |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00211457 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTTTGA AAATCGGGGA CATAGTGTCA AGAAAATCTT ATGGTTCGGA CATATTGTTC AAGGTGGTTG ACATAAAATA CGAAAAGGGA AGGAAGATAG TAGTATTAAA AGGTATTTGT TACAGACTGG AAGCCGATGC TCCTGAGACG GATTTGATTG TGCAGCCGGA CAGTTACGTT CGGGAATACA ATGCAAGAGT CAACAGGGCG ATTAATGAAA AATTGAAAAG CCTGAACGAG TCACTTATGC GTGAAAAAAC AAAAAAAAAA TTCTTTCGTG ACGCCGCTAA AGAGAATAAT GAGAACTTTC CAAGGCCTGG CAAAGTGCTT CATGTTGACG GTGATAGTGA TTATCTTGAT ACTTGTATGG AAGAATACAG GAAGCTGGGG ATGGATGCCG TAGGGGTGTA TGTGAAAGAA AAGGAGCAGC CTTTGAAAAT ATACAATCTT TTAAAAGAGC ACAAGCCTGA CATTCTTGTG CTTACCGGTC ATGACGGTGT TATAAAAAGC GAGAAAGGAT ATTCGGATAT AACAAATTAC AGAAATTCAA AATATTTTGT TGAAGCGGTG AGAGAAGCCA GACGGTTTGA CGGCAATTTA GACAGTCTTG TTATTTTTGC CGGTGCATGT CAGTCAATGT TTAAAAAAAT TATTGAGGCA GGTGCAAACT TTGCAAGTTC GCCTTACAGA GTGCTTATTC ACGCTCTGGA TCCGGTAATG GTATGCGAAA AAATAGCATT TACAAGCATA AACCAGGTGA TAAGTCCCCA GGACGTGATA AGCAAAACAA TTACCGGAGT CAAAGGTATA GGCGGAATTG AAACAAGAGG GAAATACAGA GACGGATTTC CACGGGAACC TTATAATATA AAATAA
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Protein sequence | MGLKIGDIVS RKSYGSDILF KVVDIKYEKG RKIVVLKGIC YRLEADAPET DLIVQPDSYV REYNARVNRA INEKLKSLNE SLMREKTKKK FFRDAAKENN ENFPRPGKVL HVDGDSDYLD TCMEEYRKLG MDAVGVYVKE KEQPLKIYNL LKEHKPDILV LTGHDGVIKS EKGYSDITNY RNSKYFVEAV REARRFDGNL DSLVIFAGAC QSMFKKIIEA GANFASSPYR VLIHALDPVM VCEKIAFTSI NQVISPQDVI SKTITGVKGI GGIETRGKYR DGFPREPYNI K
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