Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2335 |
Symbol | |
ID | 4809263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 2783469 |
End bp | 2784941 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640107742 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_001038730 |
Protein GI | 125974820 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000025001 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTAAAA AGATAACTAA AAATGAAGTT TTGGCGTCAC TTTTTTGGAA GCTTATAGAA AGAAGTGGAA CCCAAGGAAT AAACTTTTTG GTATCAATAG TATTGGCGAG GCTGCTTCAG CCTCAAGAAT ATGGATTGAT TGCTTTAATA TCAATTTTTA TTGCTTTAGC GAATGTATTT ATACAAACCG GATTAAACAC TGCCTTAATA CAAAAGAAAG ATGTCGATGA GAAAGATTAT TCTACGGTAT TTTATGCAAG TTTGGGAGTG GCAGGGTTTT TGTATGTTAT ACTGTTTTTT GCTTCTCCTT TTATTGCAAG CTTTTATGAT CAGGATTTAC TTGTACCTGT TTTAAGAGCA CTGTCAATTA CATTGTTTTT TGGAGCGGTA AATTCTATAC AAATTGCTGT AATATCTCGC AACATGCAGT TTAAAAAACT GTTTTACAGT AACTTTGGTG CCATAATAAT CTCCGGTTTA GTAGGTATTT TTATGGCTTT CAATGGATTT GGAGTATGGG CGTTGGTAGC ACAGCAACTC GTGAACCAAT TTTTTTCAAC TGCCATTATG TGGTTTACAG TTAAATGGAG ACCAAAATTG TTATTTAAAT TTGAACGATT GCGAGGTTTA TTTTCTTATG GATGGAAAAT ACTTGCGTCC AATTTGATAA CTACACTGTT TTTGGATTTG AGAAGTTTAA TAATAAGTAA AATATATAGC ACTGACTTGC TGGGTTACTT CAATAAAGGA AAACAATTTC CATATGTAAT CATAACCAAT ATTAACGGTT CAATTCAGTC TGTGATGCTG CCGGCATACT CGTCCATGCA GGATAATAAA GAGCGGATAA AAGGAATGGT TCGACGTTCC ATAACTACAA GTACATTTAT TATCTTTCCG ATGATGATAG GCCTTGCATT GGTAGCCGAG CCGTTGGTGA AAATAGTCCT GACAGATAAA TGGCTGCCGT GTGTGCCTTT TTTACAAATT TTTTGCATGT CCTATATGTT TATGCCTTTT CATACAGCCA ATCTTGAGGC AATCAAAGCA CTAGGGTACA GCGACTTGAT TTTAAAAATA GAAATAATCA AGAAAGTTCT CGAACTTTTA ATTTTGCTGA TCAGTTTAAA ATTTGGAGTA TATGCAATTG CATTTGGAGC GTTTATTACA AGTTTAATTT CTACAATAAT AAATTCATAC CCTAATACAA AGCTCCTTAA TTATAGCTAT AAAGAACAAT TGGCAGATAT AATGCCTTCG TTGATGTTGT CTGTTGTGAT GGGATTGGTG GTTTACAGTG TTAAATTAAT GGTATTGTCT GCTTGGTTGA CTCTTTTGAT TCAAGTTTGT GTAGGTGTAA TTATATATAT GGTTTTGGCA CAAATTTTTA AAATTGAAAC TTCGATTTAC TTATTTAACA CTCTCAAAAG TGTTTTAGAA TTCAGTAGAA ATAAAAGAAA AATCCAAGAT TAA
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Protein sequence | MGKKITKNEV LASLFWKLIE RSGTQGINFL VSIVLARLLQ PQEYGLIALI SIFIALANVF IQTGLNTALI QKKDVDEKDY STVFYASLGV AGFLYVILFF ASPFIASFYD QDLLVPVLRA LSITLFFGAV NSIQIAVISR NMQFKKLFYS NFGAIIISGL VGIFMAFNGF GVWALVAQQL VNQFFSTAIM WFTVKWRPKL LFKFERLRGL FSYGWKILAS NLITTLFLDL RSLIISKIYS TDLLGYFNKG KQFPYVIITN INGSIQSVML PAYSSMQDNK ERIKGMVRRS ITTSTFIIFP MMIGLALVAE PLVKIVLTDK WLPCVPFLQI FCMSYMFMPF HTANLEAIKA LGYSDLILKI EIIKKVLELL ILLISLKFGV YAIAFGAFIT SLISTIINSY PNTKLLNYSY KEQLADIMPS LMLSVVMGLV VYSVKLMVLS AWLTLLIQVC VGVIIYMVLA QIFKIETSIY LFNTLKSVLE FSRNKRKIQD
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