| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2197 |
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| Symbol | |
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| ID | 4811062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 2622821 |
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| End bp | 2625607 |
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| Gene Length | 2787 bp |
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| Protein Length | 928 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640107603 |
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| Product | carbohydrate-binding family 6 protein |
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| Protein accession | YP_001038592 |
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| Protein GI | 125974682 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.71663 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCTATT TTTTTGCCGG TATATGGTAC ATTTTTAGAG TAGCATTAAC AAAAACCTTT
ACCGTACCTT CAGATTATTC CGGCAAGAAA GTTTTTATAC AATTCGACGG AGCTTATATG
AACAGCCAGG TATGGATAAA CGGGACATAC TTGGGAATTC GTCCATATGG ATACAGCTCT
TTTGAATATG ACTTGACTCC ATACCTTAAC ATAGGCGGGA AAAACGTAAT TGCAGTCAAA
ATCAACAACA ACCAGCCCAA CAGTCGCTGG TATTCGGGAA GCGGCATTTA CCGCAACGTG
TGGCTGACAG TTTTGGACCC GGTTCATGTG GATTATTGCG GAATGTTTAT AACCACTCCG
AATGTAAGCA GAGATTCGGC TACAGCCAAT GTCAGCACGA AAGTGGTAAA CCAGGGCAAT
TCGGAAAAAA CAGTTTCTTT AAAAACCATA ATTATGGATG CAAATGGCAA CCAGGTTGCT
TCTGATACAT CTTCAGCAGT TAACATATCA GCCGGTAGTG ACTATACATT TAACCAAAAC
CTTACAGTAT CAAATCCCAA TTTATGGTCT CCTGATTCCC CGTATCTTTA CATGGTTCAA
ACTCAAGTAA TTGTTGATGG AAAAGTGGCT GATACCTATA AGTCAACCAT GGGATTTCGT
TATCTTAATT TTAGCAGCAC TACCGGTTTT TCTTTAAACG GCGTTAAAAC GAAAATAAAG
GGAGTATGTA TGCATCATGA CTTGGGCGCT TTAGGAGCGG CAGTTAATTA CCGTGCTATT
GAAAGGCAGC TTCAGATTAT GAAAGAGATG GGCTGCAATG CTATCCGCAC CGCGCATAAT
CCTCCTGATC CGCAAGTGTT GGAAATATGC GACAGATTGG GTCTGATGGT TATGGATGAA
GCCTTTGACT GCTGGGAAAC CGGAAAGACT GCCAATGACT ATCATCTGTA TTTCAAAGAC
TGGGCCAAAA GGGACCTTCA GGATATGGTT AAAAGAGACC GCAATCATCC GTCGGTTATT
ATGTGGAGCA TAGGCAATGA GATTCCCAAT GCTACCGTTG AAACTGCCAC AAAGCTGAAA
AACTGGGTGA AGGAAATAGA TCCCACCCGA CCGGTAACAT GGGGTTGTTT TGCTATAAAT
ATGTCGGACG ATACATACAA ACGGATTGCA AGTGTCCTTG ATTTGGTCGG ATACAACTAT
TTCCCCTTTA TGTATGACCA GGGACACAAG GAACATCCCG AATGGATAAT GTTCGGCAGT
GAAACAAGCT CGGCGGTAAG AAGCCGGGGT GTATATAAAA CTCCCACCAA CCAGAATATA
CTGACCGGCA ATGACAACCA GTGCTCATCT TATGACAACA GCGTGGTTGC CTGGGGTAAC
AGCGCAGAAT CGTCATATTA TGAAATCAAC AGACGGGATT ACATGCTTGG GGAATTTGTT
TGGACGGGAT TTGACTATAT TGGTGAACCG ACACCGTACA AATGGCCGTC GAAAAGCTCA
TATTTCGGAA TAGTTGACAC ATGCGGATTC CCCAAAGATA TATATTATTT CTATCAAAGC
AAATGGAGCG ACAAGCCGAT GGTGCATATC CTGCCCCATT GGAACTGGTC GAACGGTACT
ACCGTAGAGG TGTGGGCTTA TAGCAACTGC GATACGGTGG AGCTTTTCTT AAACGGCACT
TCCCTTGGAG TAAAGAGTAT GGGAAATAAC GGGCATGTTT CGTGGAATGT TCCCTGGGTT
CCGGGTACAC TCAGAGCAAA AGCTGTCAAA GGAAATATAG TGGTTTATGA CGAGGTAACC
ACTGCCGGTA ATCCTGCAAA AATTCAGTTA AAACCGGACA GGACAACTAT TACGGCTGAC
GGCAAGGACT TGGTATTTAT AGAAACTGAT ATTGTAGACA GTAACGGTGT TCTTGTCCCG
ACGGCAAGCA ATACTGTGAA CTTTTCCATA TCCGGACCGG GAGTAATTGT CGGAGTTGAC
AATGGAAATG CTGCAAGCCT GGAACCTTAC AAGGCAAACA GCAGGCAGGC TTTTAACGGC
AAGTGCCTCG TGATAGTCCA GGCAACCAAA ACCAACGGGA CTATTATAGT AACGGCCAGT
TCGAACGGAT TGGAATCTGA CAGAGTGATT ATTAAGACAA CCGGAGGGGA ACCTGAACCG
ACTCCTGTGC CAAGGTCTGC TTTTACACGA ATCGAAGCGG AAAGCTATGA TGCTCAGTCA
GGAATCCAGA CTGAAGATTG CAGCGAAGGC GGTAAGGATG TGGGATATAT TGAAAACGGA
GATTTTGTCG TCTACAAGGC TATTGATTTT GGCAGAGGAG CAGCAAGTTT TAAAGCGAGA
GTAGCCAGCG CTACAAGCGG AGGCAATATT GAACTTAGGA TTGACAGTAT TGACGGACCT
GTAGTTGGCA TTTGTCCGGT TGCCGGCACC GGCGGTTGGC AGGAATGGGC TGATGCGACG
TGTGAGGTAA GTGACCTGAA GGGAGTCCAT GATCTTTATC TGAAATTTAC CGGAGGCAGC
GGTTATCTGC TTAATGTGAA TTGGTTCACC TTTGTTGAAG GAAACAGTGA TGAGGATCTG
GGTGATTTAA ACGGTGACGG AAAAGTAAAC TCGACAGACC TTCAGCTAAT GAAAATGCAC
GTACTCAGGC AAAGACAGCT TACAGGAACA AGCCTCTTAA ATGCAGATGT AAACAGGGAC
GGCAAAGTGG ATTCTACCGA TGTCGCATTA TTAAAAAGAT ATATATTGAG ACAAATATCT
TCTTTTGATG ATTATGCTCG GTCTTAA
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| Protein sequence | MAYFFAGIWY IFRVALTKTF TVPSDYSGKK VFIQFDGAYM NSQVWINGTY LGIRPYGYSS
FEYDLTPYLN IGGKNVIAVK INNNQPNSRW YSGSGIYRNV WLTVLDPVHV DYCGMFITTP
NVSRDSATAN VSTKVVNQGN SEKTVSLKTI IMDANGNQVA SDTSSAVNIS AGSDYTFNQN
LTVSNPNLWS PDSPYLYMVQ TQVIVDGKVA DTYKSTMGFR YLNFSSTTGF SLNGVKTKIK
GVCMHHDLGA LGAAVNYRAI ERQLQIMKEM GCNAIRTAHN PPDPQVLEIC DRLGLMVMDE
AFDCWETGKT ANDYHLYFKD WAKRDLQDMV KRDRNHPSVI MWSIGNEIPN ATVETATKLK
NWVKEIDPTR PVTWGCFAIN MSDDTYKRIA SVLDLVGYNY FPFMYDQGHK EHPEWIMFGS
ETSSAVRSRG VYKTPTNQNI LTGNDNQCSS YDNSVVAWGN SAESSYYEIN RRDYMLGEFV
WTGFDYIGEP TPYKWPSKSS YFGIVDTCGF PKDIYYFYQS KWSDKPMVHI LPHWNWSNGT
TVEVWAYSNC DTVELFLNGT SLGVKSMGNN GHVSWNVPWV PGTLRAKAVK GNIVVYDEVT
TAGNPAKIQL KPDRTTITAD GKDLVFIETD IVDSNGVLVP TASNTVNFSI SGPGVIVGVD
NGNAASLEPY KANSRQAFNG KCLVIVQATK TNGTIIVTAS SNGLESDRVI IKTTGGEPEP
TPVPRSAFTR IEAESYDAQS GIQTEDCSEG GKDVGYIENG DFVVYKAIDF GRGAASFKAR
VASATSGGNI ELRIDSIDGP VVGICPVAGT GGWQEWADAT CEVSDLKGVH DLYLKFTGGS
GYLLNVNWFT FVEGNSDEDL GDLNGDGKVN STDLQLMKMH VLRQRQLTGT SLLNADVNRD
GKVDSTDVAL LKRYILRQIS SFDDYARS
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