Gene Cthe_2175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2175 
Symbol 
ID4810888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp2590126 
End bp2590794 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content35% 
IMG OID640107578 
Producthypothetical protein 
Protein accessionYP_001038570 
Protein GI125974660 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00973986 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAATCG ATACCAGTAA AACCATTGCG TACAAGTGTT CATCCTGTGG CGCGTTTCAA 
TTTATCAACA TATCACTCTT TGAAATGTCA AGCAAAAAAG AAAGCAGTTT TACCTGTAGA 
TGCAATGGCT CATCACTGGT TATAGCAAGA GAGGGTCTGA ATGATTATAG GATTGTCATA 
CCCTGTATAG GTTGTGGTAC CGACCATATT TACCTGTTCG GCAGAAAAGA GCTTGTGTCC 
GGTGAAATAC ATGTGTTAAA CTGTCCTAAA ACAGGGATGC AGCAGTGCTT TATAGGCAAC 
GACGAGGATG TAAGGGAAAA ATTGGACAGT CTTGAAAAGG AATTTGATGA ATTGATTGAC 
ACTCTTGGCT ATGACAATTA TTTTGTAAAC ACCCAGGTTA TGTTTGACTC GCTGAATATC 
ATTCATGATA TCGCTGAAAA AGGAAATTTA TTTTGTGAAT GTGGCAATAA TGATATTGAA 
TTATTATTAC TTTCTGATAA AATTTATTTA AGATGCAAAA AATGTCCGGC ATGTAAAATA 
ATTTATGCTT CAACAAATGA ACATCTGAAA AATAATTTGC AGACAAAGCA CATTCTCCTT 
GTGGACGATG GACAGTCCCT GGATATTAAA ACTAACGAAT CAATTGTGAA AAAAAGAGAT 
GGAAAATGA
 
Protein sequence
MIIDTSKTIA YKCSSCGAFQ FINISLFEMS SKKESSFTCR CNGSSLVIAR EGLNDYRIVI 
PCIGCGTDHI YLFGRKELVS GEIHVLNCPK TGMQQCFIGN DEDVREKLDS LEKEFDELID 
TLGYDNYFVN TQVMFDSLNI IHDIAEKGNL FCECGNNDIE LLLLSDKIYL RCKKCPACKI 
IYASTNEHLK NNLQTKHILL VDDGQSLDIK TNESIVKKRD GK