| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2110 |
|---|
| Symbol | |
|---|
| ID | 4810970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 2507125 |
|---|
| End bp | 2507898 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640107517 |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_001038510 |
|---|
| Protein GI | 125974600 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCA TTTTAGAAAT TGAAAATTTA TGTAAATATT ATGGAAAGCA GGAAAATCAG
ACAAAAGCAT TAGACGGTAT AACATTTCAA GTTATGAAGG GAGAATTTCT TGGCATTATG
GGAAGCAGCG GTTCCGGCAA ATCAACCCTC TTAAATTGCA TTGCAACTGT AATTCAGCCT
ACCGGTGGAA AGATTATTAT GTGCGGAAAG GAAGTTCAAT CACTCAAAGG CGCCGAACTG
GCAGACTACA GGGGAAAACA GATTGGTTAT CTGTTTCAGA ATTTTGAACT GCTTGATAAT
CTTACAGGCC GTGAAAACAT CCTCCTTCCC CTGTCTCTTC ATAATGTTCC CAAAAGCGAA
AGCAACAAGA GGATTATGGA AATTGCTTCG TATTTGGAAA TTACAGATGT ATTGGACAAA
TTTCCGTCTC AAATGTCCGG TGGGCAAAAG CAGAGAGTTG CAGCTGCCAG AGCGGTAATT
CTAAATCCAA GTATTATTCT GGCGGATGAG CCAACAGGTG CATTGGATTC AAAGAATGCA
AAACTACTTA TGAAAAAACT GTCGGGGCTT AATCAGGAGT ATAATGCAAC TATATTAATG
GTAACCCATG ACTGCAATGC GGCAAGCTAC TGCAAGCGAA TTTTGTTCAT TCAGGACGGA
GTGATTTTTC ATGAACTTCG CAGAAATATT CCGGAAGAAT CGCAGCAGGC ATTTTATGAG
CGCATCTTAA AAGTCATGGC GCAATTGGGA GGTGGGACTG CAAATGTTCT TTGA
|
|---|
| Protein sequence | MNTILEIENL CKYYGKQENQ TKALDGITFQ VMKGEFLGIM GSSGSGKSTL LNCIATVIQP
TGGKIIMCGK EVQSLKGAEL ADYRGKQIGY LFQNFELLDN LTGRENILLP LSLHNVPKSE
SNKRIMEIAS YLEITDVLDK FPSQMSGGQK QRVAAARAVI LNPSIILADE PTGALDSKNA
KLLMKKLSGL NQEYNATILM VTHDCNAASY CKRILFIQDG VIFHELRRNI PEESQQAFYE
RILKVMAQLG GGTANVL
|
|---|
| |