| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2100 |
|---|
| Symbol | |
|---|
| ID | 4810960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 2496719 |
|---|
| End bp | 2496958 |
|---|
| Gene Length | 240 bp |
|---|
| Protein Length | 79 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640107507 |
|---|
| Product | AbrB family transcriptional regulator |
|---|
| Protein accession | YP_001038500 |
|---|
| Protein GI | 125974590 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2002] Regulators of stationary/sporulation gene expression |
|---|
| TIGRFAM ID | [TIGR01439] looped-hinge helix DNA binding domain, AbrB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000000145229 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCTA CTGGAATCGT AAGAAAAGTC GATGAATTAG GAAGGGTTGT TCTGCCTATC
GAATTGAGAA GAACACTTGA CATTGCAGAG AAAGACGCTT TGGAAATCTA TGTTGACGGT
TCAACAATCA TACTCAAGAA GTATGAACCG GCTTGCATCT TCTGCGGAAA CGCAAAAGAT
GTAACAGTTT ACAAAGGTAA GAACATTTGC CCTGACTGTA TGAGAGAGCT GAAAAAATAA
|
|---|
| Protein sequence | MKSTGIVRKV DELGRVVLPI ELRRTLDIAE KDALEIYVDG STIILKKYEP ACIFCGNAKD
VTVYKGKNIC PDCMRELKK
|
|---|
| |