Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2076 |
Symbol | |
ID | 4810674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 2469644 |
End bp | 2470807 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640107483 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_001038476 |
Protein GI | 125974566 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.52949 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTACTA AACCTTATAT TGGCGTGTGT ACGAGAATTG TGATATATTC CGTGCTTGCA CATTTGGTTA TAGCAGGTGT CGGTTTTATC TCATTCATGT GCAAACTAAT TGATGAGACT CATGCAGACA ATTGCTTCCT CCTTGGCATG TTGATGGCCC AAAACATTTT TGTCCTGTTT TTGGAAATCT TAATTGTCGT TGCCATAATG TCGGTTATAG TGTATGCCAA TAAAAAATTG CGCAAGATTA GTTCAGAGCA CACCGCCGAT ATTGACAACC TAAAAAAACA GTTTCAACGG GAGCTTGAAG AAAAAAACGA GCTGATTCGA AACCTTACCT CGCTTTATGA GAAAACTATA AAATCAAGCA GTCAAAAATC AGAGTTTTTC TACAACATGT CCCATGAACT TAAAACCCCT TTAAGTGTCA TCCTTGGAGC CATACAGCTT ATCAGTCAGA AATATCCTCT CGACGGAAAC GACCGGAGAA AATCAACCCG ACATTTGATT ACCATAAAAC AGAACTGTTA CAGGCTTTTA AGACTTATAA ACAATATTCT GGATATCAGC CGGATTGATT CCGGATATAT CAAAACCAAC ATGGTAAATT GCAATATCGT ATATCTGGTG GAAGACATAA CAAGCTCCGT AATCCCCTAC GTGGAGCAAA AAGGTTTGAC GTTGGAATTT GACACCCTTG AAGAGGAAAT TATAACCGCT GTGGACGTTG ACAAGATTGA AAGAATAATT CTGAACCTTC TTTCCAATGC CGTCAAATTC ACCAATCCCG GAGGAAAAAT CACCGTAAAA GTTGCAAAAA AATTTAATAA AGTTATTATT AAAGTAAAAG ATACGGGCAT AGGGATACCT AAGAACATGC AGGCCGCTAT TTTTGAACGT TACCGGCAGG TAAAAAACGG TCTTACGGCG GAAATTGAAG GAAGCGGAAT AGGCCTTTCC ATTGTAAAAT CTTTTGTCGC CCTTCACAAC GGAGTTATAA AGGTAAGAAG CAAAGAAAAC AAGGGAAGCG AATTTATAAT ATCACTTCCC ATTCAGCTCT GTGAGGAAAA TCAGTGGCAT GATCCAAACG GTCAGAATTC CCAAAGCAGA ATAATTGAAG CCATCAACAT CGAGTTCTCC GACATATATT CAATGACACC GTAA
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Protein sequence | MSTKPYIGVC TRIVIYSVLA HLVIAGVGFI SFMCKLIDET HADNCFLLGM LMAQNIFVLF LEILIVVAIM SVIVYANKKL RKISSEHTAD IDNLKKQFQR ELEEKNELIR NLTSLYEKTI KSSSQKSEFF YNMSHELKTP LSVILGAIQL ISQKYPLDGN DRRKSTRHLI TIKQNCYRLL RLINNILDIS RIDSGYIKTN MVNCNIVYLV EDITSSVIPY VEQKGLTLEF DTLEEEIITA VDVDKIERII LNLLSNAVKF TNPGGKITVK VAKKFNKVII KVKDTGIGIP KNMQAAIFER YRQVKNGLTA EIEGSGIGLS IVKSFVALHN GVIKVRSKEN KGSEFIISLP IQLCEENQWH DPNGQNSQSR IIEAINIEFS DIYSMTP
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