| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1917 |
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| Symbol | |
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| ID | 4810775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 2285111 |
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| End bp | 2287828 |
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| Gene Length | 2718 bp |
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| Protein Length | 905 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640107334 |
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| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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| Protein accession | YP_001038329 |
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| Protein GI | 125974419 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000324305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATATTT TGGAGTCGGC TCTGCAAAAC AGCAATAAGG ATAACAAGGT AAAATACGGG
TTAAGTGAGA AAGAGGCGGA GAAAAGGTAT AAAAAGTATG GGCCAAATAC CTTGGCTGAA
AAGAAAAAGA TATCTCCTTT TAAGATCCTT ATTGCGCAAT TCAGTGACTT TATGGTGTTG
ATTCTTCTGG CATCCACCTT GATTTCAGCC TTCATGGGAG AATTGACAGA AGCAATTACT
ATTGTGTCCA TTGTTATTCT TAACGCACTT ATGGGATTTG TTCAGGAGTA TCGGACCGAA
AAAACCCTGG AGGCGTTAAA AAGCCTGGCG GCGCCGGTGG CAAAGGTGGT AAGGGACGGA
AAAACCGTGG AAATACCTGC GGAAAAAGTT GTGCCGGGAG ATCTTGTGGT GCTTGAGACC
GGCGACAGGA TTCCCGCGGA TGCCGTTCTG ATAGAATCCC ATGGGCTGTG TGTGGATGAG
TCTTTGCTGA CCGGTGAATC CGTGCCTGTG GAAAAACAAG TTGAAGCCGG CGGCAGAAAA
AATGTGAACG CCGGTGAAAG AAACGGCACG GTATATATGG GAACGGTTGT AACCAGCGGA
AGAGGGAAAG CTGTTGTCTG TTCCACCGGA ATGATGACCG AGATGGGAAA AATTGCTGAC
ATGATACAAA ATATAGAGAC GGAACAGACA CCTCTTCAGA AGAGACTGGA TACTTTGGGT
AAATACATAG TTTACGGATG CCTTACCATA TGTGCAATTG TTACTGTAAC CGGCATATTA
AGGGGAGAAA AACTCTTTAC AATGTTTCTT TCAGGCATAA GCCTTGCGGT TGCCGCGGTG
CCGGAAGGGC TTCCGGCCAT AGTAACAATT GCCCTGGCTT TGGGTGTCCA GAGAATGTAT
AAAAGAAACG CTTTTATAAG AAAGCTTCCG GCCGTGGAAA CTTTGGGGTG TGCCAGCGTT
ATATGCTCAG ACAAGACAGG AACTTTAACG GAGAACAAGA TGACGGTAAG GAAAATTTAT
ACCAACGGAG GCTTTGTGGA GGTTAAGGGA AGCCCATTAA GCAGCGAGGG CGAATTTATC
TCGCTGAAAA GAAAAATAGA TCCCAAAAAC AACAACTCTC TGAGACTTAC TCTTGAAATC
GGGGTTCTGT GCAACAATGC ATCAATGGTA AGAATAAAAG AAAACAGGTC TTTCGGCAAA
ATAGCATCTC TGGTTCCAAG GACGGAAAAA TGGGAACTTA GCGGAGATCC GACCGAAGCC
GCTCTTCTTG TGGCCGGAGC AAAAGGGGGA TGTACCCAGG AGTTGCTCAA TGAAAGTTAT
ACGAGAATTG ATGAAATACC TTTTGATTCA GACAGAAAGT GTATGTCGGT AATATGCGAA
AATGAAAGAG GAGAGGTTTT TGTTTTCACC AAGGGTGCTG CGGATGTAAT AATTGAAAAA
TGCAGCAAGA TATACACCTC AAGAGGAATT GTGGATTTGG ATGAGGCCGG AGTCAAAAGG
GTGCTCAAAG CAAACGATGA TATGGCAAAG GAAGCTCTGA GAGTATTGGG AGTGGCGTTT
AGAAGGCTTG ACTCCAAAAA CTACAGGCTC GATGATGTGG AAAAGGATCT TGTGTTTGCA
GGATTGATAG GAATGATAGA CCCGCCGAGA AAAGAGACGC TGGATGCGGT ACGGAAATGC
AAGCTTGCGG GAATCAAGCC TGTGATGATT ACCGGAGACC ATAAAATAAC TGCGGCGGCT
ATTGCAAGGG AGCTCAATAT AGCTTCTGAA GGTGACAGGG TACTGACGGG AGCCCAATTG
GAGCAGATGG ATGACAAGAG GCTTGAAGAA CTGGTGGATG AAGTGTCGGT GTATGCCAGG
GTTTCACCCA GGCATAAGCT GAGGATAGTT CGGGCGCTCA AAAAACGGGG GCACGTTGTT
GCCATGACCG GAGACGGTGT AAATGATGCT CCTGCAATCA AGGAAGCGGA TATTGGAGTG
GCCATGGGAA TAACAGGTAC GGATGTTACA AAGGAAGCAT CTTCAATGAT TCTCCTTGAT
GATAATTTTG CAACAATTGT TGCGGCTGTG GAGGAAGGAA GGGTTATATA CAACAACATT
CGCAAATTTA TCCGGTATAT GCTTTCCTGC AACATCGGAG AAGTGCTCAC TATGTTTGTG
GGAACCCTCA TAGGCCTTCC GCTGCCTCTT CTTCCGATTC AGATATTGTG GGTTAATCTG
GTTACGGACG GACTTCCGGC AATAGCACTG GGACTTGAAC CTGGTGACAA AGATATTATG
ATGAGGCCTC CGAGAGGAGC AAAGGAAAAC ATATTCTCCA ATGGACTGTG GCAGCTTATA
ATATTCCGGG GAGCTCTTAT AGGGCTTAGC ACCCTGGCGG TATTTGCAAG CATACTGAAC
TTTACGTCCA ATGTTGATGT TGCGAGAACC GCAGCCTTTG TAACTCTGGT TATAACCCAG
CTTATACATG TGTTTGAGTG TAAATCGGAA AGAAAAAATA TATTTGAAAT ACCGCTTTTC
AACAATATAC CTCTTGTGCT CGCAGTTTTG TGTTCGCTTG TAATGATACT GGGGGTTGTG
TATATACCGT TATTCCAGGG AATATTCAAG ACCGTACCTT TGTCTTTAAA TGACTGGATT
CTGATAGGAG GATTTTCGGC ATTGGGTCCT GTAATTTCAA GTTTTTTCAA AGTTAACTAC
AAATACATTA GAAGATAG
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| Protein sequence | MNILESALQN SNKDNKVKYG LSEKEAEKRY KKYGPNTLAE KKKISPFKIL IAQFSDFMVL
ILLASTLISA FMGELTEAIT IVSIVILNAL MGFVQEYRTE KTLEALKSLA APVAKVVRDG
KTVEIPAEKV VPGDLVVLET GDRIPADAVL IESHGLCVDE SLLTGESVPV EKQVEAGGRK
NVNAGERNGT VYMGTVVTSG RGKAVVCSTG MMTEMGKIAD MIQNIETEQT PLQKRLDTLG
KYIVYGCLTI CAIVTVTGIL RGEKLFTMFL SGISLAVAAV PEGLPAIVTI ALALGVQRMY
KRNAFIRKLP AVETLGCASV ICSDKTGTLT ENKMTVRKIY TNGGFVEVKG SPLSSEGEFI
SLKRKIDPKN NNSLRLTLEI GVLCNNASMV RIKENRSFGK IASLVPRTEK WELSGDPTEA
ALLVAGAKGG CTQELLNESY TRIDEIPFDS DRKCMSVICE NERGEVFVFT KGAADVIIEK
CSKIYTSRGI VDLDEAGVKR VLKANDDMAK EALRVLGVAF RRLDSKNYRL DDVEKDLVFA
GLIGMIDPPR KETLDAVRKC KLAGIKPVMI TGDHKITAAA IARELNIASE GDRVLTGAQL
EQMDDKRLEE LVDEVSVYAR VSPRHKLRIV RALKKRGHVV AMTGDGVNDA PAIKEADIGV
AMGITGTDVT KEASSMILLD DNFATIVAAV EEGRVIYNNI RKFIRYMLSC NIGEVLTMFV
GTLIGLPLPL LPIQILWVNL VTDGLPAIAL GLEPGDKDIM MRPPRGAKEN IFSNGLWQLI
IFRGALIGLS TLAVFASILN FTSNVDVART AAFVTLVITQ LIHVFECKSE RKNIFEIPLF
NNIPLVLAVL CSLVMILGVV YIPLFQGIFK TVPLSLNDWI LIGGFSALGP VISSFFKVNY
KYIRR
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