| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1849 |
|---|
| Symbol | |
|---|
| ID | 4809395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 2194563 |
|---|
| End bp | 2196062 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640107263 |
|---|
| Product | heavy metal transport/detoxification protein |
|---|
| Protein accession | YP_001038263 |
|---|
| Protein GI | 125974353 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG2608] Copper chaperone
[COG2836] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATA ATTTTACGGC AAATAAGCTT TATGTGCAGG GAATGACGTG CACAGGGTGT
GAGACGAGAA TAGAGAATGT ATTAAGAAAA TTGGACGGCG TAACCGATGT CAAGGCTTCA
TACACAAGCT CGACCGTTTA CGTGGCCTAT GACAAAAGCA AATTAAACCT GGATAAAATA
ATTGAGACCG TGGAAAAGCT TGATTATAAA ATAAAAGGCG TTGAAGATGA AAAAAATGCA
GGCTATGATA AAAGAGAGAA TTTTGCGCCG GAGAATGGGA GTAAAACGGA AACAGGGCAG
CTTTTGGGCA TTATCATTGT ATTTCTGGCT TTCCTGCTCA TTATAAAGAA CGGCCGGGTA
TTTAATTTCA TACCGGAAAT AGACCGGTCG ATGAGTTATG GATTGCTTTT TGTGGCGGGT
CTTTTAACTT CGCTTCACTG TGTTGCCATG TGCGGCGGAA TTAACATGTC CGTGTGCATG
CAATACAAAA GTGCCGGCGG CAAATCCAAA GCGCTGGGAA GTTCAGACGG TAAGACAGGA
AAAGCGGTTG AATTTGAACA GCTTATGCCA AGTTTTTTGT ACAACCTGGG CAGAGTAATT
TCCTATACCG TTGTAGGCGG GGTTGTGGGG GCACTCGGCT CTGTGATTAG TTTTTCAGGT
GCCGCCAAAG GTGTGGTGGC AATTATATCC GGTGTTTTTA TGGTTATCAT GGGATTGAAT
ATGCTCAATA TTTTTCCGGT TTTAAGAAAG ATTACTCCCA GAATGCCCAA AATTTTTGGC
AGGAAGATAA GCAATGCCAA AAACAAAGGG CCGCTGCTTG TGGGACTTCT AAACGGTTTC
ATGCCGTGCG GTCCTCTTCA GGCAATGCAG CTTTATGCCT TGGGCACGGG TAGTTTTATT
GCCGGTGCTA CGTCGATGTT TATGTTTTCC CTGGGGACGG TTCCTCTTAT GTTTGGCCTT
GGGGCAATAA GCTCCATAGC CGGCGGAAAA TTTACGCAAA AGATGATGAG GATAAGTGCC
GTTTTGGTGA TTGTTTTGGG AGTTGTCATG TTTAACAGGG GTCTGAGTCT TTCGGGATAC
AGTTTTCCTA TTTTCTATGC CGACTCCGCG AAGGGTGCAA GTATTGCCAG AATCGAAGGG
GATGTTCAGG TTGTTGAAAC ACAGCTGGAG CCTGGAAGAT ATGCACCGAT AGTCGTTCAA
AAGGGTATAC CGGTAAAGTG GACGATAAAA GCCAACAAAG AAGACTTGAA CGGCTGCAAC
AACGCAATTG TTGCCCGGGA GTTTGGAATA GACAATAGGA AACTGGAAGT TGGAGATAAT
ATAATTGAAT TTACGCCGGC AAGAGAAGGA GAATTTGTTT ATTCTTGTTG GATGGGAATG
ATTCATGGGT ATATAAAAGT TGTAAATGAC ATTAACGAGA TAGATCAGGA TGACATAAAC
TTAAAAAACG AAGGTTTTAA TTTGAATAAA ATACTTCCGA AAGGTTGCTG CGGCATCTAG
|
|---|
| Protein sequence | MKNNFTANKL YVQGMTCTGC ETRIENVLRK LDGVTDVKAS YTSSTVYVAY DKSKLNLDKI
IETVEKLDYK IKGVEDEKNA GYDKRENFAP ENGSKTETGQ LLGIIIVFLA FLLIIKNGRV
FNFIPEIDRS MSYGLLFVAG LLTSLHCVAM CGGINMSVCM QYKSAGGKSK ALGSSDGKTG
KAVEFEQLMP SFLYNLGRVI SYTVVGGVVG ALGSVISFSG AAKGVVAIIS GVFMVIMGLN
MLNIFPVLRK ITPRMPKIFG RKISNAKNKG PLLVGLLNGF MPCGPLQAMQ LYALGTGSFI
AGATSMFMFS LGTVPLMFGL GAISSIAGGK FTQKMMRISA VLVIVLGVVM FNRGLSLSGY
SFPIFYADSA KGASIARIEG DVQVVETQLE PGRYAPIVVQ KGIPVKWTIK ANKEDLNGCN
NAIVAREFGI DNRKLEVGDN IIEFTPAREG EFVYSCWMGM IHGYIKVVND INEIDQDDIN
LKNEGFNLNK ILPKGCCGI
|
|---|
| |