Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1848 |
Symbol | |
ID | 4809394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 2192225 |
End bp | 2194456 |
Gene Length | 2232 bp |
Protein Length | 743 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640107262 |
Product | copper-translocating P-type ATPase |
Protein accession | YP_001038262 |
Protein GI | 125974352 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.525064 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGGAA AAGGATTGTC GGTAAAAAAT CAAAATATGG CGAAAGTTGA GCTTAAAATA TCGGGAATGT CCTGTGCTGC GTGTAGTGCA AGAATTGAAA AAAGACTGAA TAAAGTTGCC GGAGTGGCCA AAGCATCCGT AAACCTTGCG ACGGAAAGGG CCAACATTGA GTATGACGCG GACAAAGTCA AAACGGATGA TTTGATTAAA ATTGTGGACG ACCTTGGCTA TAAGGCCGAA AGGATTGAAA ATATCTCAAA AGACCGTGAA AAAGAGCAGA GGGAGAAGGA AATAAAGAAG CTTAAGGCAG AACTTATTGC TTCTGCCATT TTAAGTTCTC CGCTGATACT GGCAATGGTT TTCATGCTCA CAGGTATTGA TGTTCCTTTC CTGCACAATG AATATTTCCA GCTTGTGATT GCAACTCCGG TGCAGTTTAT TATTGGACTT AGGTTCTACA GGAATGCTTA CCATGCCATA AAAGCAAGAA GCGCCAACAT GGACGTGCTG ATTGCAATGG GAACATCGGC GGCTTATTTT TTCAGTGTGT ACAATGCTTT CTTTGCTCAT CCGGTGGAAA TGGGCATGAT GAAAGAGCTG TATTTTGAAG CAAGCAGTAC GATTATTACG CTGATTCTTC TTGGAAAGTA CCTTGAGGCT GTCGCCAAAG GAAAAACTTC AGAAGCCATT AAGAAACTCA TGGGCCTTCA GGCAAAGACC GCAAGGGTTG TAAGAAATGG TGTTGAAGAG GATATTCCGG TGGAAGAGGT GCAAGTTGGA GATATTATTG TTGTGCGGCC CGGTGAGAAA ATTCCGGTGG ACGGAAGGAT AATTGAAGGA AATTCCTCCG TCGATGAATC GATGCTGACC GGTGAAAGCC TGCCGGTGGA GAAAAAGGTC GGAGATTTTG TAACCGGTGC GACCATAAAC AAATTCGGTA CATTCAAGTT TGAAGCCACC AAAGTCGGAA AAGACACGGT TCTTTCCCAG ATTATCAAAA TGGTGGAGGA TGCCCAGGGT TCAAAGGCTC CCATTCAAAA AATCGCCGAC CGGGTATCCG GCATCTTTGT ACCTGCAGTC ATTGGAATAG CTGTTGTAAC CTTTGCGGCG TGGTACCTGG CAACCGGCGA ACTGAATTCA GCCATTGTAA ATGCTGTGTC GGTACTGGTT ATTGCCTGCC CCTGCGCCCT TGGACTGGCA ACACCGACCG CCATCATGGT GGGAACCGGA AAAGGAGCGG AAAAGGGCAT ACTGATAAAA GGCGGCGAAC ACCTGGAGAT GGCATACAAG CTTAATTCCG TTGTATTGGA CAAAACCGGA ACAATAACAA AGGGCAAACC TGAAGTTACT GATATCATTC CCTTGGGAAG TATGGAAAAG AACGAAATTG TGAAACTTTC CGCCGTCGCT GAGAAGGCAT CGGAACATCC TTTGGGAGTT GCCATATATG AGAAGGGTAA AAGCGAATTT GGAGCCATAC CGGATCCGGC AAAGTTTGAA GCAATTCCCG GAAGGGGTGT TGCGGCAGTA TTCGATGATA AGAACATATA TATTGGCACA AGAAAACTTA TGAAAGAAAA AGGACTTGAT ATTTCGAAAA TAGAGTCCGA TATTGCAAAA CTCGAAGACG AAGGCAAAAC TGCAATGCTT ATGGCGGTAG ATGATCGGGT GGAAGCAATC CTGGCCGTTG CGGATACCGT GAAGGAGCAC TCCGGGGAAG CAATAGAGCA GCTTTTGAAA ATGGGAATTG ACGTGTATAT GATTACAGGC GATAATGAAA GAACGGCAAA GGCTATTGCA AAACAGGTGG GAATAACCAA TGTGCTGGCT GAAGTTTTGC CTGAAAACAA AGCGGAGGAA GTTGAGAAAC TTAAAAAACA GGGCAGAATT GTCGGAATGG TGGGAGACGG CATTAATGAC GCCCCGGCCC TTGCAACGGC GGATATTGGA ATGGCTATCG GCACAGGAAC GGATGTTGCC ATGGAAGCTG CGGATATTAC CCTTATGAGA GGGGATTTGA GAGCAATACC GACTGCCATA AAGCTGTCCA GAAGAACAAT GAGGAAAATC AAGCAGAATC TTTTCTGGGC GTTTATATAC AATATAATCG GCATTCCCTT TGCAGCCTTT GGCCTGCTTA GTCCGATTAT TGCGGGAGCG GCCATGGCCT TTAGCTCCGT GTCGGTTGTA ACCAATTCTT TAAGCTTGAA AAGATACGAC CCGGAAAAGT AA
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Protein sequence | MDGKGLSVKN QNMAKVELKI SGMSCAACSA RIEKRLNKVA GVAKASVNLA TERANIEYDA DKVKTDDLIK IVDDLGYKAE RIENISKDRE KEQREKEIKK LKAELIASAI LSSPLILAMV FMLTGIDVPF LHNEYFQLVI ATPVQFIIGL RFYRNAYHAI KARSANMDVL IAMGTSAAYF FSVYNAFFAH PVEMGMMKEL YFEASSTIIT LILLGKYLEA VAKGKTSEAI KKLMGLQAKT ARVVRNGVEE DIPVEEVQVG DIIVVRPGEK IPVDGRIIEG NSSVDESMLT GESLPVEKKV GDFVTGATIN KFGTFKFEAT KVGKDTVLSQ IIKMVEDAQG SKAPIQKIAD RVSGIFVPAV IGIAVVTFAA WYLATGELNS AIVNAVSVLV IACPCALGLA TPTAIMVGTG KGAEKGILIK GGEHLEMAYK LNSVVLDKTG TITKGKPEVT DIIPLGSMEK NEIVKLSAVA EKASEHPLGV AIYEKGKSEF GAIPDPAKFE AIPGRGVAAV FDDKNIYIGT RKLMKEKGLD ISKIESDIAK LEDEGKTAML MAVDDRVEAI LAVADTVKEH SGEAIEQLLK MGIDVYMITG DNERTAKAIA KQVGITNVLA EVLPENKAEE VEKLKKQGRI VGMVGDGIND APALATADIG MAIGTGTDVA MEAADITLMR GDLRAIPTAI KLSRRTMRKI KQNLFWAFIY NIIGIPFAAF GLLSPIIAGA AMAFSSVSVV TNSLSLKRYD PEK
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