Gene Cthe_1848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1848 
Symbol 
ID4809394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2192225 
End bp2194456 
Gene Length2232 bp 
Protein Length743 aa 
Translation table11 
GC content46% 
IMG OID640107262 
Productcopper-translocating P-type ATPase 
Protein accessionYP_001038262 
Protein GI125974352 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.525064 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGGAA AAGGATTGTC GGTAAAAAAT CAAAATATGG CGAAAGTTGA GCTTAAAATA 
TCGGGAATGT CCTGTGCTGC GTGTAGTGCA AGAATTGAAA AAAGACTGAA TAAAGTTGCC
GGAGTGGCCA AAGCATCCGT AAACCTTGCG ACGGAAAGGG CCAACATTGA GTATGACGCG
GACAAAGTCA AAACGGATGA TTTGATTAAA ATTGTGGACG ACCTTGGCTA TAAGGCCGAA
AGGATTGAAA ATATCTCAAA AGACCGTGAA AAAGAGCAGA GGGAGAAGGA AATAAAGAAG
CTTAAGGCAG AACTTATTGC TTCTGCCATT TTAAGTTCTC CGCTGATACT GGCAATGGTT
TTCATGCTCA CAGGTATTGA TGTTCCTTTC CTGCACAATG AATATTTCCA GCTTGTGATT
GCAACTCCGG TGCAGTTTAT TATTGGACTT AGGTTCTACA GGAATGCTTA CCATGCCATA
AAAGCAAGAA GCGCCAACAT GGACGTGCTG ATTGCAATGG GAACATCGGC GGCTTATTTT
TTCAGTGTGT ACAATGCTTT CTTTGCTCAT CCGGTGGAAA TGGGCATGAT GAAAGAGCTG
TATTTTGAAG CAAGCAGTAC GATTATTACG CTGATTCTTC TTGGAAAGTA CCTTGAGGCT
GTCGCCAAAG GAAAAACTTC AGAAGCCATT AAGAAACTCA TGGGCCTTCA GGCAAAGACC
GCAAGGGTTG TAAGAAATGG TGTTGAAGAG GATATTCCGG TGGAAGAGGT GCAAGTTGGA
GATATTATTG TTGTGCGGCC CGGTGAGAAA ATTCCGGTGG ACGGAAGGAT AATTGAAGGA
AATTCCTCCG TCGATGAATC GATGCTGACC GGTGAAAGCC TGCCGGTGGA GAAAAAGGTC
GGAGATTTTG TAACCGGTGC GACCATAAAC AAATTCGGTA CATTCAAGTT TGAAGCCACC
AAAGTCGGAA AAGACACGGT TCTTTCCCAG ATTATCAAAA TGGTGGAGGA TGCCCAGGGT
TCAAAGGCTC CCATTCAAAA AATCGCCGAC CGGGTATCCG GCATCTTTGT ACCTGCAGTC
ATTGGAATAG CTGTTGTAAC CTTTGCGGCG TGGTACCTGG CAACCGGCGA ACTGAATTCA
GCCATTGTAA ATGCTGTGTC GGTACTGGTT ATTGCCTGCC CCTGCGCCCT TGGACTGGCA
ACACCGACCG CCATCATGGT GGGAACCGGA AAAGGAGCGG AAAAGGGCAT ACTGATAAAA
GGCGGCGAAC ACCTGGAGAT GGCATACAAG CTTAATTCCG TTGTATTGGA CAAAACCGGA
ACAATAACAA AGGGCAAACC TGAAGTTACT GATATCATTC CCTTGGGAAG TATGGAAAAG
AACGAAATTG TGAAACTTTC CGCCGTCGCT GAGAAGGCAT CGGAACATCC TTTGGGAGTT
GCCATATATG AGAAGGGTAA AAGCGAATTT GGAGCCATAC CGGATCCGGC AAAGTTTGAA
GCAATTCCCG GAAGGGGTGT TGCGGCAGTA TTCGATGATA AGAACATATA TATTGGCACA
AGAAAACTTA TGAAAGAAAA AGGACTTGAT ATTTCGAAAA TAGAGTCCGA TATTGCAAAA
CTCGAAGACG AAGGCAAAAC TGCAATGCTT ATGGCGGTAG ATGATCGGGT GGAAGCAATC
CTGGCCGTTG CGGATACCGT GAAGGAGCAC TCCGGGGAAG CAATAGAGCA GCTTTTGAAA
ATGGGAATTG ACGTGTATAT GATTACAGGC GATAATGAAA GAACGGCAAA GGCTATTGCA
AAACAGGTGG GAATAACCAA TGTGCTGGCT GAAGTTTTGC CTGAAAACAA AGCGGAGGAA
GTTGAGAAAC TTAAAAAACA GGGCAGAATT GTCGGAATGG TGGGAGACGG CATTAATGAC
GCCCCGGCCC TTGCAACGGC GGATATTGGA ATGGCTATCG GCACAGGAAC GGATGTTGCC
ATGGAAGCTG CGGATATTAC CCTTATGAGA GGGGATTTGA GAGCAATACC GACTGCCATA
AAGCTGTCCA GAAGAACAAT GAGGAAAATC AAGCAGAATC TTTTCTGGGC GTTTATATAC
AATATAATCG GCATTCCCTT TGCAGCCTTT GGCCTGCTTA GTCCGATTAT TGCGGGAGCG
GCCATGGCCT TTAGCTCCGT GTCGGTTGTA ACCAATTCTT TAAGCTTGAA AAGATACGAC
CCGGAAAAGT AA
 
Protein sequence
MDGKGLSVKN QNMAKVELKI SGMSCAACSA RIEKRLNKVA GVAKASVNLA TERANIEYDA 
DKVKTDDLIK IVDDLGYKAE RIENISKDRE KEQREKEIKK LKAELIASAI LSSPLILAMV
FMLTGIDVPF LHNEYFQLVI ATPVQFIIGL RFYRNAYHAI KARSANMDVL IAMGTSAAYF
FSVYNAFFAH PVEMGMMKEL YFEASSTIIT LILLGKYLEA VAKGKTSEAI KKLMGLQAKT
ARVVRNGVEE DIPVEEVQVG DIIVVRPGEK IPVDGRIIEG NSSVDESMLT GESLPVEKKV
GDFVTGATIN KFGTFKFEAT KVGKDTVLSQ IIKMVEDAQG SKAPIQKIAD RVSGIFVPAV
IGIAVVTFAA WYLATGELNS AIVNAVSVLV IACPCALGLA TPTAIMVGTG KGAEKGILIK
GGEHLEMAYK LNSVVLDKTG TITKGKPEVT DIIPLGSMEK NEIVKLSAVA EKASEHPLGV
AIYEKGKSEF GAIPDPAKFE AIPGRGVAAV FDDKNIYIGT RKLMKEKGLD ISKIESDIAK
LEDEGKTAML MAVDDRVEAI LAVADTVKEH SGEAIEQLLK MGIDVYMITG DNERTAKAIA
KQVGITNVLA EVLPENKAEE VEKLKKQGRI VGMVGDGIND APALATADIG MAIGTGTDVA
MEAADITLMR GDLRAIPTAI KLSRRTMRKI KQNLFWAFIY NIIGIPFAAF GLLSPIIAGA
AMAFSSVSVV TNSLSLKRYD PEK